ncRNA ID | osa-miR5077 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:14094752-14094842 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 19 |
Mature sequence(if miRNA) | 13 - GUUCGCGUCGGGUUCACCA - 31 |
Stem-loop(if miRNA) |
UGCCUUU      UU G      - UU A  -AG  AG   G   G        UCGUUG  C CGUCGG G  C CC   CU  GUG UUC C        ||||||  | |||||| |  | ||   ||  ||| ||| C        AGCAAC  G GCGGCC C  G GG   GG  CAU AAG A CAGCAGU      CU A      G UG -  GAA  -A   G   U |
Stem-loop sequence | UGCCUUUUCGUUGUUCGCGUCGGGUUCACCAGCUAGGUGGUUCGCCAUGAAGUACAGGAAGGGGGUCGCCGGCGAGUCCAACGAUGACGAC |
1 | PMID:21352554
"Discovery of barley miRNAs through deep sequencing of short reads"; Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U; BMC Genomics. 12:129(2011). |