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BaseInfo

ncRNA ID novel_zma_miR187
Species Zea mays
Class miRNA
Genome position Chr4:20461657-20461739 [+]
Reference genome RefGen_v4
Source SRR2089709
Length 24
Mature sequence(if miRNA) 60 - UGGUAAUUUUAGAACUAAAAUGGA - 83
Stem-loop(if miRNA) --U        GUAU                          
   GUUUUAGU    GAAUUGCUAAAUAUAGAAACUAAAAUA
   ||||||||    ||||||||||||||||||||||||||A
   UAAAAUCA    UUUAAUGGUUUAUAUCUUUGAUUUUGA
AGG        AGAU                          
Stem-loop sequence UGUUUUAGUGUAUGAAUUGCUAAAUAUAGAAACUAAAAUAAAGUUUUAGUUUCUAUAUUUGGUAAUUUUAGAACUAAAAUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ060524.1
ncRNA:24   AGGUAAAAUCAAGAUUUUAAUGGU   1
  ||=||||||||||*||||||||||
targets:87   UCUAUUUUAGUUCCAAAAUUACCA   110

1.5 TSA: Zea mays contig61646, mRNA sequence NA coding protein psRNATarget