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BaseInfo

ncRNA ID	novel_zma_miR185
Species	Zea mays
Class	miRNA
Genome position	Chr10:33599454-33599535 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089712;SRR2089714;SRR5451003;SRR5451005;SRR1997866;SRR2089704
Length	22
Mature sequence(if miRNA)	61 - CGCGGCCUGAAGCGGAGUCGAA - 82
Stem-loop(if miRNA)	--GU   G          G     -  ACGAG     GGA G     GCU UGUUUCAGGC GCGCG UG     AAAGU   G A     ||| |||||||||| ||||| ||     |||||   | C     UGA GCGAAGUCCG CGCGU AC     UUUCG   C U AAGC   G          G     G  --AAG     AGG U
Stem-loop sequence	GUGCUGUGUUUCAGGCGGCGCGUGACGAGAAAGUGGAGGACUUCGGAGCUUUGAACAGUGCGCGGCCUGAAGCGGAGUCGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ064221.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:69   UAUGACUCCGCUUCAGGCAGCU   90 Target Full Sequence	2.5	TSA: Zea mays contig65344, mRNA sequence	NA	coding protein	psRNATarget
BT035270.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1202   UAUGACUCCGCUUCAGGCAGCU   1223 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0052K16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138265.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1202   UAUGACUCCGCUUCAGGCAGCU   1223 Target Full Sequence	2.5	Zea mays Protein kinase superfamily protein (pco143563), mRNA	NA	coding protein	psRNATarget
BT085215.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1111   UAUGACUCCGCUUCAGGCAGCU   1132 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0335M12 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008649142.2	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1163   UAUGACUCCGCUUCAGGCAGCU   1184 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (pco143563), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU957042.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1559   UAUGACUCCGCUUCAGGCAGCU   1580 Target Full Sequence	2.5	Zea mays clone 1581175 protein kinase mRNA, complete cds	NA	coding protein	psRNATarget
EU957618.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1717   UAUGACUCCGCUUCAGGCAGCU   1738 Target Full Sequence	2.5	Zea mays clone 1599239 protein kinase mRNA, complete cds	NA	coding protein	psRNATarget
EU957103.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1823   UAUGACUCCGCUUCAGGCAGCU   1844 Target Full Sequence	2.5	Zea mays clone 1582826 protein kinase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154480.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1823   UAUGACUCCGCUUCAGGCAGCU   1844 Target Full Sequence	2.5	Zea mays protein kinase (LOC100281561), mRNA	NA	coding protein	psRNATarget
BT061570.1	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1924   UAUGACUCCGCUUCAGGCAGCU   1945 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0159O08 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656697.2	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:1959   UAUGACUCCGCUUCAGGCAGCU   1980 Target Full Sequence	2.5	PREDICTED: Zea mays protein kinase (LOC100281561), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008656698.2	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:2085   UAUGACUCCGCUUCAGGCAGCU   2106 Target Full Sequence	2.5	PREDICTED: Zea mays protein kinase (LOC100281561), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008649141.2	ncRNA:22   AAGCUGAGGCGAAGUCCGGCGC   1   |*=|||||||||||||||*||* targets:2627   UAUGACUCCGCUUCAGGCAGCU   2648 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (pco143563), transcript variant X1, mRNA	NA	coding protein	psRNATarget