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BaseInfo

ncRNA ID	novel_zma_miR180
Species	Zea mays
Class	miRNA
Genome position	Chr4:192995905-192995978 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089713;SRR2089707
Length	24
Mature sequence(if miRNA)	51 - AAAUUCGGGUUUGGGUUUGGGUAA - 74
Stem-loop(if miRNA)	--     U     U       C  U          CA   ACCCA ACUCG ACCCGAA UU CGGGUACCCG  A   ||||| ||||| ||||||| || ||||||||||   UGGGU UGGGU UGGGCUU AA GCCCAUGGGC  U AA     U     U       A  C          UU
Stem-loop sequence	ACCCAUACUCGUACCCGAACUUUCGGGUACCCGCAAUUUCGGGUACCCGCAAAUUCGGGUUUGGGUUUGGGUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU957014.1	ncRNA:24   AAUGGGUUUGGGUUUGGGCUUAAA   1   |||||||||||||||||||||||| targets:804   UUACCCAAACCCAAACCCGAAUUU   827 Target Full Sequence	0.0	Zea mays clone 1580507 glyoxalase/bleomycin resistance protein/dioxygenase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154449.1	ncRNA:24   AAUGGGUUUGGGUUUGGGCUUAAA   1   |||||||||||||||||||||||| targets:804   UUACCCAAACCCAAACCCGAAUUU   827 Target Full Sequence	0.0	Zea mays glyoxalase/bleomycin resistance protein/dioxygenase (LOC100281531), mRNA	NA	coding protein	psRNATarget
EU944440.1	ncRNA:24   AAUGGGUUUGGGUUUGGGCUUAAA   1   |||=|||||||||||||||||*|| targets:529   UUAUCCAAACCCAAACCCGAAAUU   552 Target Full Sequence	1.5	Zea mays clone 218592 mRNA sequence	NA	coding protein	psRNATarget