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BaseInfo

ncRNA ID novel_zma_miR171
Species Zea mays
Class miRNA
Genome position Chr4:158285704-158285784 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089713;SRR2089715;SRR5105959;SRR5105961
Length 21
Mature sequence(if miRNA) 1 - GUGCAGCUCUCCUCUGGCAUG - 21
Stem-loop(if miRNA) -- UG          C     U --       U    GA GC
  G  CAGCUCUCCU UGGCA G  AAGGCUG GAGA  G  A
  |  |||||||||| ||||| |  ||||||| ||||  |
  C  GUCGAGAGGA ACCGU C  UUCCGGU CUUU  C  U
GU CU          A     C CG       -    AA AG
Stem-loop sequence GUGCAGCUCUCCUCUGGCAUGAAGGCUGUGAGAGAGGCAUGACAAUUUCUGGCCUUGCCCUGCCAAAGGAGAGCUGUCCUG