ncRNA ID | novel_zma_miR168 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:174988589-174988769 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583943;SRR2647388;SRR2647391 |
Length | 24 |
Mature sequence(if miRNA) | 158 - CCUCUUCAUCUGUGAGUUCUUCAC - 181 |
Stem-loop(if miRNA) |
--                                                                                       A   GAAGAACUCACAGAUGAAGAGGUUAUAGAGUCUGCACAUGUAGAGCAAGUGCAUCUUGCUUAGCUCUCGCCCAGUCCUUCAAGUAAG G   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| C   CUUCUUGAGUGUCUACUUCUCCAAUAUCUCAGACGUGUACAUCUCGUUCACGUAGAACGAAUCGAGAGCGGGUCAGGAAGUUCAUUC C CA                                                                                       U |
Stem-loop sequence | GAAGAACUCACAGAUGAAGAGGUUAUAGAGUCUGCACAUGUAGAGCAAGUGCAUCUUGCUUAGCUCUCGCCCAGUCCUUCAAGUAAGAGCCUCUUACUUGAAGGACUGGGCGAGAGCUAAGCAAGAUGCACUUGCUCUACAUGUGCAGACUCUAUAACCUCUUCAUCUGUGAGUUCUUCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ069468.1 |
|
2.5 | TSA: Zea mays contig05104, mRNA sequence | NA | coding protein | psRNATarget |