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BaseInfo

ncRNA ID	novel_zma_miR162
Species	Zea mays
Class	miRNA
Genome position	Chr4:138150612-138150693 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2287164
Length	21
Mature sequence(if miRNA)	1 - AGAGAGGAUUGAAGGGGUUAC - 21
Stem-loop(if miRNA)	--           A                  U     CAA   AGAGAGGAUUG AGGGGUUACAAUCUCUUU CUAUU   A   ||||||||||| |||||||||||||||||| |||||   UCUCUCCUAAC UCCCCGAUGUUAGGGGAA GAUAA   A GG           C                  C     AUC
Stem-loop sequence	AGAGAGGAUUGAAGGGGUUACAAUCUCUUUUCUAUUCAAAACUAAAUAGCAAGGGGAUUGUAGCCCCUCCAAUCCUCUCUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166530.1	ncRNA:21   CAUUGGGGAAGUUAGGAGAGA   1   *||=||||||||||||||||* targets:85   CUAGCCCCUUCAAUCCUCUCC   105 Target Full Sequence	2.0	Sequence 4194 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238199.1	ncRNA:21   CAUUGGGGAAGUUAGGAGAGA   1   *||=||||||||||||||||* targets:85   CUAGCCCCUUCAAUCCUCUCC   105 Target Full Sequence	2.0	Sequence 4194 from Patent EP2985353	NA	coding protein	psRNATarget
HI406069.1	ncRNA:21   CAUUGGGGAAGUUAGGAGAGA   1   *||=||||||||||||||||* targets:85   CUAGCCCCUUCAAUCCUCUCC   105 Target Full Sequence	2.0	Sequence 4194 from Patent EP2074227	NA	coding protein	psRNATarget
BT036654.1	ncRNA:21   CAUUGGGGAAGUUAGGAGAGA   1   *||=||||||||||||||||* targets:1038   CUAGCCCCUUCAAUCCUCUCC   1058 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0128D05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001349849.1	ncRNA:21   CAUUGGGGAAGUUAGGAGAGA   1   *||=||||||||||||||||* targets:871   CUAGCCCCUUCAAUCCUCUCC   891 Target Full Sequence	2.0	Zea mays uncharacterized LOC100194187 (LOC100194187), mRNA	NA	coding protein	psRNATarget
EU952717.1	ncRNA:21   CAUUGGGGAAGUUAGGAGAGA   1   *||=||||||||||||||||* targets:871   CUAGCCCCUUCAAUCCUCUCC   891 Target Full Sequence	2.0	Zea mays clone 1287070 zinc finger protein mRNA, complete cds	NA	coding protein	psRNATarget