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BaseInfo

ncRNA ID novel_zma_miR158
Species Zea mays
Class miRNA
Genome position Chr3:131583630-131583710 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089711;SRR2089714;SRR2287160;SRR2287161;SRR2287162;SRR5451003;SRR5451004;SRR1997866;SRR5451005;SRR2089698;SRR2089699;SRR2089700;SRR2089703;SRR2089704;SRR2089705;SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 58 - ACCUAGAACACUCGGCAAAGACGC - 81
Stem-loop(if miRNA) --U                                    U
   UCUUUGUCGAGUGUUUUAGGUGACGCUUGGCAAAGG A
   |||||||||||||||||||||||||||||||||||| U
   AGAAACGGCUCACAAGAUCCACUGUGAGCUGUUUCU G
CGC                                    U
Stem-loop sequence UUCUUUGUCGAGUGUUUUAGGUGACGCUUGGCAAAGGUAUGUUCUUUGUCGAGUGUCACCUAGAACACUCGGCAAAGACGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974507.1
ncRNA:24   CGCAGAAA-CGGCUCACAAGAUCCA   1
  |=|*||||-||||||||||||||||
targets:527   GUGACUUUUGCCGAGUGUUCUAGGU   551

2.0 Zea mays clone 451014 hypothetical protein mRNA, complete cds NA coding protein psRNATarget