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BaseInfo

ncRNA ID	novel_zma_miR156
Species	Zea mays
Class	miRNA
Genome position	Chr3:131578423-131578605 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089711;SRR5451004;SRR1997866
Length	24
Mature sequence(if miRNA)	1 - GUGUUUGGUUGGAUGUACAUGGUG - 24
Stem-loop(if miRNA)	--          G  U  A  U    U       --       U   A   A   UA  --GUU    - GAGAGUCACAUAGGGGCGAGGUAAA   GUGUUUGGUU GA GU CA GGUG GAUGGGA  GGGGCGG CAC GUU UUU  GU     UGGA U                         C   |||||||||| || || || |||| |||||||  ||||||| ||| ||| |||  ||     |||| |   CACAAACCAA CU CA GU UCAC CUACUCU  CCCCGCU GUG CAG GGA  UA     CCCU G                         A UA          A  U  -  U    C       GC       -   G   A   GC  AAAAA    A UGUGGCGGUGGUUUUUGAUGAUACC
Stem-loop sequence	GUGUUUGGUUGGAUGUACAUGGUGUGAUGGGAGGGGCGGUCACAGUUAUUUUAGUGUUUGGAUGAGAGUCACAUAGGGGCGAGGUAAACACCAUAGUAGUUUUUGGUGGCGGUGUGAUCCCAAAAAAUCGAGGAGACGGUGUCGCCCCCGUCUCAUCCCACUUUGACUUCAAACCAAACACAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ075878.1	ncRNA:24   GUGGUACAUGUAGGUUGGUUUGUG   1   ==|==|||=||||||||||||||* targets:138   UGCUGUGUGCAUCCAACCAAACAG   161 Target Full Sequence	2.0	TSA: Zea mays contig11515, mRNA sequence	NA	coding protein	psRNATarget
NM_001151949.1	ncRNA:24   GUGGUACAUGUAGGUUGGUUUGUG   1   |*||||*||||||||||||||=|| targets:1858   CUCCAUUUACAUCCAACCAAAUAC   1881 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100278785), mRNA	NA	coding protein	psRNATarget
EU975095.1	ncRNA:24   GUGGUACAUGUAGGUUGGUUUGUG   1   |*||||*||||||||||||||=|| targets:1858   CUCCAUUUACAUCCAACCAAAUAC   1881 Target Full Sequence	2.5	Zea mays clone 468769 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT061001.1	ncRNA:24   GUGGUACAUGUAGGUUGGUUUGUG   1   |*||||*||||||||||||||=|| targets:2044   CUCCAUUUACAUCCAACCAAAUAC   2067 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0083N14 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020548181.1	ncRNA:24   GUGGUACAUGUAGGUUGGUUUGUG   1   |*||*||||||||||||=|||||| targets:2071   CUCCUUGUACAUCCAACUAAACAC   2094 Target Full Sequence	1.5	PREDICTED: Zea mays proline--tRNA ligase, cytoplasmic-like (LOC103648437), transcript variant X4, mRNA	NA	coding protein	psRNATarget
BT084785.2	ncRNA:24   GUGGUACAUGUAGGUUGGUUUGUG   1   =||=-|*||||||||||||||||| targets:455   UACU-UAUACAUCCAACCAAACAC   477 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0180O09 mRNA, complete cds	NA	coding protein	psRNATarget