Search result

BaseInfo

ncRNA ID	novel_zma_miR142
Species	Zea mays
Class	miRNA
Genome position	Chr3:8249344-8249396 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR1997865
Length	24
Mature sequence(if miRNA)	30 - GGUGGAUGAUGAGCUAGACGACGU - 53
Stem-loop(if miRNA)	--    GA  A   G   -        G   GGUG  UG UGA CUA GACGACGU A   ||||  || ||| ||| ||||||||   CCGU  GC GUU GAU CUGCUGCG U AU    -A  -   G   G        G
Stem-loop sequence	GGUGGAUGAUGAGCUAGACGACGUGAUGGCGUCGUCGUAGGUUGCGAUGCCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020543898.1	ncRNA:24   UGCAGCAGAUCGAGUAGUAGGUGG   1   |||*||||*||||||||||||||| targets:344   ACGCCGUCCAGCUCAUCAUCCACC   367 Target Full Sequence	1.0	PREDICTED: Zea mays oral cancer-overexpressed protein 1 homolog (LOC103639445), transcript variant X4, mRNA	NA	coding protein	psRNATarget
EU952646.1	ncRNA:24   UGCAGCAGAUCGAGUAGUAGGUGG   1   |||*||||*||||||||=|||||| targets:591   ACGCCGUCCAGCUCAUCGUCCACC   614 Target Full Sequence	2.5	Zea mays clone 1285286 mRNA sequence	NA	coding protein	psRNATarget
XM_020551972.1	ncRNA:24   UGCAGCAGAUCGAGUAGUAGGUGG   1   |||*=|||*||||||||=|||||| targets:1222   ACGCUGUCGAGCUCAUCGUCCACC   1245 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109945661 (LOC109945661), mRNA	NA	coding protein	psRNATarget