ncRNA ID | osa-miR5531 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:10288528-10288615 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 16 - ACUGACUGCCUUGAGCUCCGGG - 37 |
Stem-loop(if miRNA) |
G   UCAAG  G  G    ACU      A     ---  -   U  U  GAU     CU GU ACUG   GCCUUG GCUCC   GG GCA GG U  |||     || || ||||   |||||| |||||   || ||| || C  CUA     GG CG UGAC   CGGAGU UGAGG   UC CGU CC U A   ---UA  G  -    -GU      A     AGU  A   U  A |
Stem-loop sequence | GGAUUCAAGCUGGUGACUGACUGCCUUGAGCUCCGGGCAUGGUUCUACCUUGCACUUGAGGAGUAUGAGGCUGCAGUGCGGGAUAUCA |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |