Search result

BaseInfo

ncRNA ID	novel_zma_miR137
Species	Zea mays
Class	miRNA
Genome position	Chr3:3814858-3814929 [+]
Reference genome	RefGen_v4
Source	SRR2089709
Length	22
Mature sequence(if miRNA)	1 - UCUAUUUCUUUUUAGUUGUCGC - 22
Stem-loop(if miRNA)	--  UA                          U  A   UC  UUUCUUUUUAGUUGUCGCUGGAUAGU CA U   ||  |||||||||||||||||||||||||| ||   AG  AAAGAAAAAUCAACAGCGACCUAUCA GU U GG  GC                          C  U
Stem-loop sequence	UCUAUUUCUUUUUAGUUGUCGCUGGAUAGUUCAAUUUUGCACUAUCCAGCGACAACUAAAAAGAAACGGAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163740.1	ncRNA:22   CGCUGUUGAUUUUUCUUUAUCU   1   |||||||*|||||||||||=|| targets:66   GCGACAAAUAAAAAGAAAUGGA   87 Target Full Sequence	2.5	Sequence 1404 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235409.1	ncRNA:22   CGCUGUUGAUUUUUCUUUAUCU   1   |||||||*|||||||||||=|| targets:66   GCGACAAAUAAAAAGAAAUGGA   87 Target Full Sequence	2.5	Sequence 1404 from Patent EP2985353	NA	coding protein	psRNATarget
HI403279.1	ncRNA:22   CGCUGUUGAUUUUUCUUUAUCU   1   |||||||*|||||||||||=|| targets:66   GCGACAAAUAAAAAGAAAUGGA   87 Target Full Sequence	2.5	Sequence 1404 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020543671.1	ncRNA:22   CGCUGUUGAUUUUUCUUUAUCU   1   **||||||*|||||||=||||| targets:75   AAGACAACAAAAAAGAGAUAGA   96 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger protein 7 (LOC100283296), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020543669.1	ncRNA:22   CGCUGUUGAUUUUUCUUUAUCU   1   **||||||*|||||||=||||| targets:75   AAGACAACAAAAAAGAGAUAGA   96 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger protein 7 (LOC100283296), transcript variant X1, mRNA	NA	coding protein	psRNATarget