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BaseInfo

ncRNA ID	osa-miR5148a
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:9968953-9969028 [-]
Reference genome	MSU7
Source	miRBase
Length	24
Mature sequence(if miRNA)	3 - UGAGGGGUAGAAAUGUCAUAUCAU - 26
Stem-loop(if miRNA)	-CAC            G        ----   A   CAA     GAUAUGACGUUU UACCCCUC    ACA GUA   A     |||||||||||| ||||||||    ||| |||   U     CUAUACUGUAAA AUGGGGAG    UGU CGU   A UGUA            G        UAAC   A   AAU
Stem-loop sequence	CACGAUAUGACGUUUGUACCCCUCACAAGUACAAAUAUAAUGCAUGUCAAUGAGGGGUAGAAAUGUCAUAUCAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015759864.1	ncRNA:24   UA--CUAUACUGUAAAGAUGGGGAGU   1   ||--|||||||||||||||||||||| targets:1048   AUACGAUAUGACAUUUCUACCCCUCA   1073 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B (LOC4333190), mRNA	mitotic-spindle organizing protein 1B(LOC4333190)	coding protein	psRNATarget
XM_015772668.1	ncRNA:24   UA--CUAUACUGUAAAGAUGGGGAGU   1   ||--|||||||||||||||||||||| targets:1048   AUACGAUAUGACAUUUCUACCCCUCA   1073 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B-like (LOC107277991), mRNA	mitotic-spindle organizing protein 1B-like(LOC107277991)	coding protein	psRNATarget

Reference

1	PMID:21525786 "Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus"; Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D; RNA Biol. 8:538-547(2011).