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BaseInfo

ncRNA ID	ath-miRf10009-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UUUGGAUGGAUCAUUUGGAU - NA
Stem-loop(if miRNA)	U                       --CU  UU    --   CAU  CAUCCAGAUGAUUCAUCCAAAUG    UG  AAAU  UGU   A  |||||||||||||||||||||||    ||  ||||  |||   A  GUAGGUUUACUAGGUAGGUUUAC    AC  UUUA  ACA   A G                       CUCU  CU    CU   AAC
Stem-loop sequence	UCAUCCAGAUGAUUCAUCCAAAUGCUUGUUAAAUUGUCAUAAACAAACAUCAUUUUCCAUCUCCAUUUGGAUGGAUCAUUUGGAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY072466.1	ncRNA:20   UAGGUUUACUAGGUAGGUUU   1   ||||||||||||=||||||| targets:260   AUCCAAAUGAUCUAUCCAAA   279 Target Full Sequence	1.5	Arabidopsis thaliana glutathione transferase AtGST 10 (MEE6.28) mRNA, complete cds	NA	coding protein	psRNATarget
AY054659.1	ncRNA:20   UAGGUUUACUAGGUAGGUUU   1   ||||||||||||=||||||| targets:274   AUCCAAAUGAUCUAUCCAAA   293 Target Full Sequence	1.5	Arabidopsis thaliana glutathione transferase AtGST 10 (MEE6.28) mRNA, complete cds	NA	coding protein	psRNATarget
NM_123486.4	ncRNA:20   UAGGUUUACUAGGUAGGUUU   1   ||||||||||||=||||||| targets:435   AUCCAAAUGAUCUAUCCAAA   454 Target Full Sequence	1.5	Arabidopsis thaliana glutathione S-transferase THETA 1 (GSTT1), mRNA	glutathione S-transferase THETA 1(GSTT1)	coding protein	psRNATarget
NM_001334933.1	ncRNA:20   UAGGUUUACUAGGUAGGUUU   1   ||=|*||||||||||||||| targets:1903   AUUCUAAUGAUCCAUCCAAA   1922 Target Full Sequence	2.0	Arabidopsis thaliana RAD3-like DNA-binding helicase protein partial mRNA	RAD3-like DNA-binding helicase protein(AT1G79890)	coding protein	psRNATarget
NM_001334932.1	ncRNA:20   UAGGUUUACUAGGUAGGUUU   1   ||=|*||||||||||||||| targets:2036   AUUCUAAUGAUCCAUCCAAA   2055 Target Full Sequence	2.0	Arabidopsis thaliana RAD3-like DNA-binding helicase protein partial mRNA	RAD3-like DNA-binding helicase protein(AT1G79890)	coding protein	psRNATarget
NM_106638.2	ncRNA:20   UAGGUUUACUAGGUAGGUUU   1   ||=|*||||||||||||||| targets:2610   AUUCUAAUGAUCCAUCCAAA   2629 Target Full Sequence	2.0	Arabidopsis thaliana RAD3-like DNA-binding helicase protein partial mRNA	RAD3-like DNA-binding helicase protein(AT1G79890)	coding protein	psRNATarget
NM_001334931.1	ncRNA:20   UAGGUUUACUAGGUAGGUUU   1   ||=|*||||||||||||||| targets:2656   AUUCUAAUGAUCCAUCCAAA   2675 Target Full Sequence	2.0	Arabidopsis thaliana RAD3-like DNA-binding helicase protein mRNA	RAD3-like DNA-binding helicase protein(AT1G79890)	coding protein	psRNATarget
AJ131580.1	ncRNA:20   UAGGUUUACUAGGUAGGUUU   1   ||||=|||||||=||||||| targets:260   AUCCGAAUGAUCUAUCCAAA   279 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for glutathione transferase AtGST 10	NA	coding protein	psRNATarget