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BaseInfo

ncRNA ID novel_zma_miR124
Species Zea mays
Class miRNA
Genome position Chr3:68243155-68243205 [+]
Reference genome RefGen_v4
Source SRR1583943
Length 24
Mature sequence(if miRNA) 28 - GUUUGCCGAGUCUUCUUUGCCGAG - 51
Stem-loop(if miRNA) --           U   U  C   G
  CGGCAAAGAAG CUU GC GAU C
  ||||||||||| ||| || ||| A
  GCCGUUUCUUC GAG CG UUG C
GA           U   C  U   U
Stem-loop sequence CGGCAAAGAAGUCUUUGCCGAUGCACUGUUUGCCGAGUCUUCUUUGCCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU951934.1
ncRNA:24   GAGCCGUUUCUUCUGAGCCGUUUG   1
  |||*||**|||||||||||||||*
targets:735   CUCAGCUCAGAAGACUCGGCAAAG   758

3.0 Zea mays clone 1063616 ferritin-1 mRNA, complete cds NA coding protein psRNATarget
NM_001153397.1
ncRNA:24   GAGCCGUUUCUUCUGAGCCGUUUG   1
  |||*||**|||||||||||||||*
targets:735   CUCAGCUCAGAAGACUCGGCAAAG   758

3.0 Zea mays ferritin-1 (LOC100280477), mRNA NA coding protein psRNATarget
DQ245391.1
ncRNA:24   GAGCCGUUUCUUCUGAGCCGUUUG   1
  |||*||**|||||||||||||||*
targets:722   CUCAGCUCAGAAGACUCGGCAAAG   745

3.0 Zea mays clone 15033 mRNA sequence NA coding protein psRNATarget