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BaseInfo

ncRNA ID	novel_zma_miR120
Species	Zea mays
Class	miRNA
Genome position	Chr3:118835400-118835450 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR1997866
Length	24
Mature sequence(if miRNA)	1 - CACCGGACUGUCCGGUGUGCUCAU - 24
Stem-loop(if miRNA)	--C             CUA           GGCGCACCGGACA   UCCGGUGG    |||||||||||||   |||||||C    UCGUGUGGCCUGU   AGGCCACG UAC             --C
Stem-loop sequence	CGGCGCACCGGACACUAUCCGGUGGCGCACCGGACUGUCCGGUGUGCUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ108756.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||=||=||||||||||||||||| targets:145   AUGGGCGCACCGGACAGUCCGGUG   168 Target Full Sequence	1.0	TSA: Zea mays contig44415, mRNA sequence	NA	coding protein	psRNATarget
NM_001174416.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||=|==||||||||||||||||| targets:588   AUGGGUGCACCGGACAGUCCGGUG   611 Target Full Sequence	2.0	Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA	NA	coding protein	psRNATarget
NM_001174416.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|==||||||||||||||||| targets:823   CUG-GUGCACCGGACAGUCCGGUG   845 Target Full Sequence	2.0	Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA	NA	coding protein	psRNATarget
NM_001174416.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||*-|||||||||||||=||||| targets:716   GUGU-CACACCGGACAGUUCGGUG   738 Target Full Sequence	1.5	Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA	NA	coding protein	psRNATarget
BT061709.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||=|==||||||||||||||||| targets:588   AUGGGUGCACCGGACAGUCCGGUG   611 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds	NA	coding protein	psRNATarget
BT061709.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|==||||||||||||||||| targets:823   CUG-GUGCACCGGACAGUCCGGUG   845 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds	NA	coding protein	psRNATarget
BT061709.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||*-|||||||||||||=||||| targets:716   GUGU-CACACCGGACAGUUCGGUG   738 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:24   UA-CUCGUGUGGCCUGUCAGGCCAC   1   ||-|=||=||||||||||||||||| targets:483   AUCGGGCGCACCGGACAGUCCGGUG   507 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:599   CGGUGCACACCGGACAGUCCGGUG   622 Target Full Sequence	0.0	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:697   CGGUGCACACCGGACAGUCCGGUG   720 Target Full Sequence	0.0	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
NM_001175949.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:800   CGGUGCACCACCGGACAGUCCGGUG   824 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA	NA	coding protein	psRNATarget
BT066811.2	ncRNA:24   UA-CUCGUGUGGCCUGUCAGGCCAC   1   ||-|=||=||||||||||||||||| targets:483   AUCGGGCGCACCGGACAGUCCGGUG   507 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:599   CGGUGCACACCGGACAGUCCGGUG   622 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:697   CGGUGCACACCGGACAGUCCGGUG   720 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066811.2	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:800   CGGUGCACCACCGGACAGUCCGGUG   824 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:24   UA-CUCGUGUGGCCUGUCAGGCCAC   1   ||-|=||=||||||||||||||||| targets:4377   AUCGGGCGCACCGGACAGUCCGGUG   4401 Target Full Sequence	1.0	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:4494   CGGUGCACACCGGACAGUCCGGUG   4517 Target Full Sequence	0.0	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:4609   CGGUGCACACCGGACAGUCCGGUG   4632 Target Full Sequence	0.0	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
XM_020546123.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:4711   CGGUGCACCACCGGACAGUCCGGUG   4735 Target Full Sequence	2.0	PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA	NA	coding protein	psRNATarget
EZ066204.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||-||=||||||||||||||||| targets:91   AUG-GCGCACCGGACAGUCCGGUG   113 Target Full Sequence	1.0	TSA: Zea mays contig01838, mRNA sequence	NA	coding protein	psRNATarget
EZ106959.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|||||||||||||||||||| targets:96   GUG-GCACACCGGACAGUCCGGUG   118 Target Full Sequence	0.0	TSA: Zea mays contig42617, mRNA sequence	NA	coding protein	psRNATarget
EZ109126.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||-||=||||||||||||||||| targets:175   AUG-GCGCACCGGACAGUCCGGUG   197 Target Full Sequence	1.0	TSA: Zea mays contig44785, mRNA sequence	NA	coding protein	psRNATarget
BT065201.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=|||||||||||||||||||| targets:723   GUUGGCACACCGGACAGUCCGGUG   746 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|=|==||||||||||||||||| targets:585   UCGGGUGCACCGGACAGUCCGGUG   608 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:742   CGGUGCACACCGGACAGUCCGGUG   765 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=*|*||||||||||||||||| targets:814   GUUGUCCCACCGGACAGUCCGGUG   837 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
BT083610.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||-||=||||||||||||||||| targets:475   AUG-GCGCACCGGACAGUCCGGUG   497 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT083610.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|||||||||||||||||||| targets:799   GUG-GCACACCGGACAGUCCGGUG   821 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT083610.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||||||||||| targets:697   CUG-GCACACCGGACAGUCCGGUG   719 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |*|=||=||||||||||||||||| targets:331   ACGGGCGCACCGGACAGUCCGGUG   354 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:447   CGGUGCACACCGGACAGUCCGGUG   470 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:561   CGGUGCACACCGGACAGUCCGGUG   584 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
BT061124.2	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:663   CGGUGCACCACCGGACAGUCCGGUG   687 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |*|=||=||||||||||||||||| targets:331   ACGGGCGCACCGGACAGUCCGGUG   354 Target Full Sequence	1.0	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:447   CGGUGCACACCGGACAGUCCGGUG   470 Target Full Sequence	0.0	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:561   CGGUGCACACCGGACAGUCCGGUG   584 Target Full Sequence	0.0	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
NM_001165861.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:663   CGGUGCACCACCGGACAGUCCGGUG   687 Target Full Sequence	2.0	Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA	NA	coding protein	psRNATarget
EU940845.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|||||||||||||||||||| targets:1381   GUG-GCACACCGGACAGUCCGGUG   1403 Target Full Sequence	0.0	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
EU940845.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:1399   CGGUGCACACCGGACAGUCCGGUG   1422 Target Full Sequence	0.0	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
LQ241540.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||||||||||| targets:12   CUG-GCACACCGGACAGUCCGGUG   34 Target Full Sequence	0.0	Sequence 7535 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241540.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|==||||||||||||||||| targets:93   CUG-GUGCACCGGACAGUCCGGUG   115 Target Full Sequence	2.0	Sequence 7535 from Patent EP2985353	NA	coding protein	psRNATarget
JB169871.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||||||||||| targets:12   CUG-GCACACCGGACAGUCCGGUG   34 Target Full Sequence	0.0	Sequence 7535 from Patent EP2559767	NA	coding protein	psRNATarget
JB169871.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|==||||||||||||||||| targets:93   CUG-GUGCACCGGACAGUCCGGUG   115 Target Full Sequence	2.0	Sequence 7535 from Patent EP2559767	NA	coding protein	psRNATarget
HI409410.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||||||||||| targets:12   CUG-GCACACCGGACAGUCCGGUG   34 Target Full Sequence	0.0	Sequence 7535 from Patent EP2074227	NA	coding protein	psRNATarget
HI409410.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|==||||||||||||||||| targets:93   CUG-GUGCACCGGACAGUCCGGUG   115 Target Full Sequence	2.0	Sequence 7535 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|=||=||||||||||||||||| targets:496   UCGGGCGCACCGGACAGUCCGGUG   519 Target Full Sequence	1.0	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:622   CGGUGCACACCGGACAGUCCGGUG   645 Target Full Sequence	0.0	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:736   CGGUGCACACCGGACAGUCCGGUG   759 Target Full Sequence	0.0	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:839   CGGUGCACACCGGACAGUCCGGUG   862 Target Full Sequence	0.0	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|=||=||||||||||||||||| targets:496   UCGGGCGCACCGGACAGUCCGGUG   519 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:622   CGGUGCACACCGGACAGUCCGGUG   645 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:736   CGGUGCACACCGGACAGUCCGGUG   759 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:839   CGGUGCACACCGGACAGUCCGGUG   862 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
LQ242062.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|||||||||||||||=|||| targets:11   GUG-GCACACCGGACAGUCUGGUG   33 Target Full Sequence	1.5	Sequence 8057 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242062.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =**=||*||||||||||||||||| targets:30   GGUGGCCCACCGGACAGUCCGGUG   53 Target Full Sequence	1.0	Sequence 8057 from Patent EP2985353	NA	coding protein	psRNATarget
HI409932.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|||||||||||||||=|||| targets:11   GUG-GCACACCGGACAGUCUGGUG   33 Target Full Sequence	1.5	Sequence 8057 from Patent EP2074227	NA	coding protein	psRNATarget
HI409932.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =**=||*||||||||||||||||| targets:30   GGUGGCCCACCGGACAGUCCGGUG   53 Target Full Sequence	1.0	Sequence 8057 from Patent EP2074227	NA	coding protein	psRNATarget
JB170393.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|||||||||||||||=|||| targets:11   GUG-GCACACCGGACAGUCUGGUG   33 Target Full Sequence	1.5	Sequence 8057 from Patent EP2559767	NA	coding protein	psRNATarget
JB170393.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =**=||*||||||||||||||||| targets:30   GGUGGCCCACCGGACAGUCCGGUG   53 Target Full Sequence	1.0	Sequence 8057 from Patent EP2559767	NA	coding protein	psRNATarget
EU940831.1	ncRNA:24   UAC-U----CGUGUGGCCUGUCAGGCCAC   1   |||-|----|||||||||||||||||||| targets:290   AUGUACGGUGCACACCGGACAGUCCGGUG   318 Target Full Sequence	0.0	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
EU940831.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:409   CGGUGCACACCGGACAGUCCGGUG   432 Target Full Sequence	0.0	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
EU940831.1	ncRNA:24   UACU-CGUG-UGGCCUGUCAGGCCAC   1   *||=-||||-|||||||||||||||| targets:532   CUGGUGCACCACCGGACAGUCCGGUG   557 Target Full Sequence	2.0	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
EU940831.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|*=||||||||||||||||| targets:180   GUG-GAGCACCGGACAGUCCGGUG   202 Target Full Sequence	2.0	Zea mays clone 1157596 mRNA sequence	NA	coding protein	psRNATarget
BT069074.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||-||=|||||||||||=||||| targets:416   AUG-GCGCACCGGACAGUUCGGUG   438 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
BT069074.2	ncRNA:24   UAC----UCGUGUGGCCUGUCAGGCCAC   1   =||----=|==||||||||||||||||| targets:758   GUGCCCUGGUGCACCGGACAGUCCGGUG   785 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
BT069074.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =**=*=*||||||||||||||||| targets:681   GGUGCUUCACCGGACAGUCCGGUG   704 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||||||||||||||| targets:491   GUG-GCGCACCGGACAGUCCGGUG   513 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||||||||||| targets:780   CUG-GCGCACCGGACAGUCCGGUG   802 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   ||||-|*||=|||||||||||||| targets:699   AUGA-CUCAUCGGACAGUCCGGUG   721 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
NM_001175715.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||*||=|||||||||||||| targets:621   GUUGGCUCAUCGGACAGUCCGGUG   644 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA	NA	coding protein	psRNATarget
BT066013.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||||||||||||||| targets:491   GUG-GCGCACCGGACAGUCCGGUG   513 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066013.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||||||||||| targets:780   CUG-GCGCACCGGACAGUCCGGUG   802 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066013.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   ||||-|*||=|||||||||||||| targets:699   AUGA-CUCAUCGGACAGUCCGGUG   721 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT066013.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||*||=|||||||||||||| targets:621   GUUGGCUCAUCGGACAGUCCGGUG   644 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||=||||||||||||||||| targets:600   GUUGGCGCACCGGACAGUCCGGUG   623 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:714   CGGUGCACACCGGACAGUCCGGUG   737 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT065921.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||||||||||| targets:505   CUG-GCGCACCGGACAGUCCGGUG   527 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||=||||||||||||||||| targets:600   GUUGGCGCACCGGACAGUCCGGUG   623 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:714   CGGUGCACACCGGACAGUCCGGUG   737 Target Full Sequence	0.0	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||||||||||| targets:505   CUG-GCGCACCGGACAGUCCGGUG   527 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
BT061123.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||||||=||||||||||||| targets:264   GUUGGCACACUGGACAGUCCGGUG   287 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget
BT061123.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|=|==||||||||||||||||| targets:137   UCGGGUGCACCGGACAGUCCGGUG   160 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget
BT061123.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:283   CGGUGCACACCGGACAGUCCGGUG   306 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds	NA	coding protein	psRNATarget
EZ065990.1	ncRNA:23   ACUCGUGUGGCCUGUCAGGCCAC   1   ||-||=||||||||||||||||| targets:1   UG-GCGCACCGGACAGUCCGGUG   22 Target Full Sequence	1.0	TSA: Zea mays contig01624, mRNA sequence	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:470   CGGUGCACACCGGACAGUCCGGUG   493 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||||||| targets:600   CGGUGCACACCGGACAGUCCGGUG   623 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||||||||||| targets:376   CUG-GCGCACCGGACAGUCCGGUG   398 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:724   CGGUGCACCACCGGACAGUCCGGUG   748 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
HI410113.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|==||||||||||||||||| targets:149   GUG-GUGCACCGGACAGUCCGGUG   171 Target Full Sequence	2.0	Sequence 8238 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242243.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|==||||||||||||||||| targets:149   GUG-GUGCACCGGACAGUCCGGUG   171 Target Full Sequence	2.0	Sequence 8238 from Patent EP2985353	NA	coding protein	psRNATarget
JB170574.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-|==||||||||||||||||| targets:149   GUG-GUGCACCGGACAGUCCGGUG   171 Target Full Sequence	2.0	Sequence 8238 from Patent EP2559767	NA	coding protein	psRNATarget
HI409089.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=|||=||||||||||||| targets:67   GUG-GCGCACUGGACAGUCCGGUG   89 Target Full Sequence	2.0	Sequence 7214 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241219.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=|||=||||||||||||| targets:67   GUG-GCGCACUGGACAGUCCGGUG   89 Target Full Sequence	2.0	Sequence 7214 from Patent EP2985353	NA	coding protein	psRNATarget
JB169550.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=|||=||||||||||||| targets:67   GUG-GCGCACUGGACAGUCCGGUG   89 Target Full Sequence	2.0	Sequence 7214 from Patent EP2559767	NA	coding protein	psRNATarget
EU940974.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||||||||||| targets:2540   CUG-GCGCACCGGACAGUCCGGUG   2562 Target Full Sequence	1.0	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
EU940974.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*||||||=||||||||||||| targets:2655   CGGUGCACACUGGACAGUCCGGUG   2678 Target Full Sequence	1.0	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
EU940974.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||||||=|||| targets:2769   CGGUGCACACCGGACAGUCUGGUG   2792 Target Full Sequence	1.5	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
JB169812.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||||||||||| targets:30   CGGUGUACACCGGACAGUCCGGUG   53 Target Full Sequence	1.0	Sequence 7476 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241481.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||||||||||| targets:30   CGGUGUACACCGGACAGUCCGGUG   53 Target Full Sequence	1.0	Sequence 7476 from Patent EP2985353	NA	coding protein	psRNATarget
HI409351.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||||||||||| targets:30   CGGUGUACACCGGACAGUCCGGUG   53 Target Full Sequence	1.0	Sequence 7476 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242039.1	ncRNA:24   UACU-CGUG-UGGCCUGUCAGGCCAC   1   *||=-||||-|||||||||||||||| targets:31   CUGGUGCACCACCGGACAGUCCGGUG   56 Target Full Sequence	2.0	Sequence 8034 from Patent EP2985353	NA	coding protein	psRNATarget
JB170370.1	ncRNA:24   UACU-CGUG-UGGCCUGUCAGGCCAC   1   *||=-||||-|||||||||||||||| targets:31   CUGGUGCACCACCGGACAGUCCGGUG   56 Target Full Sequence	2.0	Sequence 8034 from Patent EP2559767	NA	coding protein	psRNATarget
HI409909.1	ncRNA:24   UACU-CGUG-UGGCCUGUCAGGCCAC   1   *||=-||||-|||||||||||||||| targets:31   CUGGUGCACCACCGGACAGUCCGGUG   56 Target Full Sequence	2.0	Sequence 8034 from Patent EP2074227	NA	coding protein	psRNATarget
EZ103080.1	ncRNA:24   UACUCGUGUGGCCUGU-CAGGCCAC   1   =||-||||||||||||-|||||||| targets:84   GUG-GCACACCGGACAUGUCCGGUG   107 Target Full Sequence	3.0	TSA: Zea mays contig38737, mRNA sequence	NA	coding protein	psRNATarget
BT086229.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*||||||=||||||||||||| targets:533   CGGUGCACACUGGACAGUCCGGUG   556 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget
BT086229.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|==||||||||||||||||| targets:830   CUG-GUGCACCGGACAGUCCGGUG   852 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget
HI409657.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||||||||||||*||||||| targets:36   GUG-GCACACCGGACAAUCCGGUG   58 Target Full Sequence	1.5	Sequence 7782 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241787.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||||||||||||*||||||| targets:36   GUG-GCACACCGGACAAUCCGGUG   58 Target Full Sequence	1.5	Sequence 7782 from Patent EP2985353	NA	coding protein	psRNATarget
JB170118.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||||||||||||*||||||| targets:36   GUG-GCACACCGGACAAUCCGGUG   58 Target Full Sequence	1.5	Sequence 7782 from Patent EP2559767	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||*||||||||||||||||| targets:706   GUUGGCUCACCGGACAGUCCGGUG   729 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:850   CGGUGCACCACCGGACAGUCCGGUG   874 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||*|||||||||||| targets:485   GUG-GCGCACCAGACAGUCCGGUG   507 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||*|||||||||| targets:611   CGGUGCACACCGGUCAGUCCGGUG   634 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176009.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |*|=|*|||||||||*|||||||| targets:2382   AAGGGGACACCGGACUGUCCGGUG   2405 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383353 (LOC100383353), mRNA	NA	coding protein	psRNATarget
BT066975.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |*|=|*|||||||||*|||||||| targets:2382   AAGGGGACACCGGACUGUCCGGUG   2405 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0133B08 mRNA, complete cds	NA	coding protein	psRNATarget
U41079.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|||-|*||||||||||||||||| targets:26   GUGA-CUCACCGGACAGUCCGGUG   48 Target Full Sequence	1.0	Zea mays copia-type retroelement PREM-2, partial sequence	NA	coding protein	psRNATarget
BT016820.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |*|=|=|||||||||*|||||||| targets:6   AGGGGUACACCGGACUGUCCGGUG   29 Target Full Sequence	2.5	Zea mays clone Contig653 mRNA sequence	NA	coding protein	psRNATarget
BT016820.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||*|||||||| targets:203   CGGUGCACACCGGACUGUCCGGUG   226 Target Full Sequence	1.5	Zea mays clone Contig653 mRNA sequence	NA	coding protein	psRNATarget
EU959991.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||-||=||||||||*|||||||| targets:698   AUG-GCGCACCGGACUGUCCGGUG   720 Target Full Sequence	2.5	Zea mays clone 221041 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008663618.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||-||=||||||||*|||||||| targets:784   AUG-GCGCACCGGACUGUCCGGUG   806 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103640564 (LOC103640564), mRNA	NA	coding protein	psRNATarget
BT068871.2	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||*||||||||||||||||| targets:688   GUUGGCUCACCGGACAGUCCGGUG   711 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0146G02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176621.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||*||||||||||||||||| targets:688   GUUGGCUCACCGGACAGUCCGGUG   711 Target Full Sequence	1.0	Zea mays uncharacterized LOC100384010 (LOC100384010), mRNA	NA	coding protein	psRNATarget
EU952168.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:303   CUG-GCGCACCGGACUGUCCGGUG   325 Target Full Sequence	2.5	Zea mays clone 1215356 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU952168.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*||||||=|||||*||||||| targets:1886   CAGUGCACACUGGACAAUCCGGUG   1909 Target Full Sequence	2.5	Zea mays clone 1215356 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
LQ242313.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 8308 from Patent EP2985353	NA	coding protein	psRNATarget
HI408938.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7063 from Patent EP2074227	NA	coding protein	psRNATarget
JB169499.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7163 from Patent EP2559767	NA	coding protein	psRNATarget
HI410183.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 8308 from Patent EP2074227	NA	coding protein	psRNATarget
HI409038.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7163 from Patent EP2074227	NA	coding protein	psRNATarget
JB169399.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7063 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241168.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7163 from Patent EP2985353	NA	coding protein	psRNATarget
JB170644.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 8308 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241068.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7063 from Patent EP2985353	NA	coding protein	psRNATarget
HI409732.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||*|||||||| targets:12   CUG-GCACACCGGACUGUCCGGUG   34 Target Full Sequence	1.5	Sequence 7857 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241570.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7565 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241862.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||*|||||||| targets:12   CUG-GCACACCGGACUGUCCGGUG   34 Target Full Sequence	1.5	Sequence 7857 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242080.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||*|||||||| targets:12   CUG-GCACACCGGACUGUCCGGUG   34 Target Full Sequence	1.5	Sequence 8075 from Patent EP2985353	NA	coding protein	psRNATarget
HI409440.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7565 from Patent EP2074227	NA	coding protein	psRNATarget
JB169901.1	ncRNA:24   UACUCGUG-UGGCCUGUCAGGCCAC   1   **|*||||-|||||||||||||||| targets:30   CGGUGCACCACCGGACAGUCCGGUG   54 Target Full Sequence	2.0	Sequence 7565 from Patent EP2559767	NA	coding protein	psRNATarget
HI409950.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||*|||||||| targets:12   CUG-GCACACCGGACUGUCCGGUG   34 Target Full Sequence	1.5	Sequence 8075 from Patent EP2074227	NA	coding protein	psRNATarget
JB170193.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||*|||||||| targets:12   CUG-GCACACCGGACUGUCCGGUG   34 Target Full Sequence	1.5	Sequence 7857 from Patent EP2559767	NA	coding protein	psRNATarget
JB170411.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||*|||||||| targets:12   CUG-GCACACCGGACUGUCCGGUG   34 Target Full Sequence	1.5	Sequence 8075 from Patent EP2559767	NA	coding protein	psRNATarget
EU950973.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|==||||||||||||||||| targets:182   CGGUGUGCACCGGACAGUCCGGUG   205 Target Full Sequence	2.0	Zea mays clone 677173 mRNA sequence	NA	coding protein	psRNATarget
BT069634.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||*|||||||| targets:720   CGGUGUACACCGGACUGUCCGGUG   743 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0193J19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176828.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||*|||||||| targets:720   CGGUGUACACCGGACUGUCCGGUG   743 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384263 (LOC100384263), mRNA	NA	coding protein	psRNATarget
HI410002.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||*||||||||||||=|||| targets:66   GUUGGCUCACCGGACAGUCUGGUG   89 Target Full Sequence	2.5	Sequence 8127 from Patent EP2074227	NA	coding protein	psRNATarget
JB170463.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||*||||||||||||=|||| targets:66   GUUGGCUCACCGGACAGUCUGGUG   89 Target Full Sequence	2.5	Sequence 8127 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242132.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =|*=||*||||||||||||=|||| targets:66   GUUGGCUCACCGGACAGUCUGGUG   89 Target Full Sequence	2.5	Sequence 8127 from Patent EP2985353	NA	coding protein	psRNATarget
EU970212.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:401   CUG-GCGCACCGGACUGUCCGGUG   423 Target Full Sequence	2.5	Zea mays clone 342257 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU970212.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =**=||=||||||||*|||||||| targets:739   GGUGGCGCACCGGACUGUCCGGUG   762 Target Full Sequence	2.5	Zea mays clone 342257 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
LQ242135.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||*|||||||||||| targets:5   GUG-GCGCACCAGACAGUCCGGUG   27 Target Full Sequence	2.5	Sequence 8130 from Patent EP2985353	NA	coding protein	psRNATarget
JB170466.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||*|||||||||||| targets:5   GUG-GCGCACCAGACAGUCCGGUG   27 Target Full Sequence	2.5	Sequence 8130 from Patent EP2559767	NA	coding protein	psRNATarget
HI410005.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||*|||||||||||| targets:5   GUG-GCGCACCAGACAGUCCGGUG   27 Target Full Sequence	2.5	Sequence 8130 from Patent EP2074227	NA	coding protein	psRNATarget
BT060603.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-|||||||||||*|||||||| targets:1061   CUG-GCACACCGGACUGUCCGGUG   1083 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0021N16 mRNA, complete cds	NA	coding protein	psRNATarget
BT060603.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||||||*|||||||| targets:1546   GUG-GCGCACCGGACUGUCCGGUG   1568 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0021N16 mRNA, complete cds	NA	coding protein	psRNATarget
HI409836.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||*|||||||| targets:35   CGGUGCACACCGGACUGUCCGGUG   58 Target Full Sequence	1.5	Sequence 7961 from Patent EP2074227	NA	coding protein	psRNATarget
JB170297.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||*|||||||| targets:35   CGGUGCACACCGGACUGUCCGGUG   58 Target Full Sequence	1.5	Sequence 7961 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241966.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|||||||||||*|||||||| targets:35   CGGUGCACACCGGACUGUCCGGUG   58 Target Full Sequence	1.5	Sequence 7961 from Patent EP2985353	NA	coding protein	psRNATarget
EZ101438.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||**|=||||*|||||||||||| targets:37   GUGCACGCACCAGACAGUCCGGUG   60 Target Full Sequence	2.5	TSA: Zea mays contig37094, mRNA sequence	NA	coding protein	psRNATarget
BT042818.1	ncRNA:24   UACU---CGUGUGGCCUGUCAGGCCAC   1   =||=---||=||||||||*|||||||| targets:828   GUGGCAGGCGCACCGGACUGUCCGGUG   854 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0047A15 mRNA, complete cds	NA	coding protein	psRNATarget
BT018386.1	ncRNA:24   UACU-CGUGUGGCCUGUCAGGCCAC   1   *||=-||||||=||||*|||||||| targets:770   CUGGUGCACACUGGACUGUCCGGUG   794 Target Full Sequence	2.5	Zea mays clone EL01N0313G04.d mRNA sequence	NA	coding protein	psRNATarget
BT054171.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   ***|||||||=||||*|||||||| targets:1330   CCUAGCACACUGGACUGUCCGGUG   1353 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0148C07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152406.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   ***|||||||=||||*|||||||| targets:1330   CCUAGCACACUGGACUGUCCGGUG   1353 Target Full Sequence	2.5	Zea mays uncharacterized LOC100279393 (LOC100279393), mRNA	NA	coding protein	psRNATarget
XM_020548733.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||||||*|||||||| targets:2193   GUG-GCGCACCGGACUGUCCGGUG   2215 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized mitochondrial protein AtMg00810-like (LOC109944105), mRNA	NA	coding protein	psRNATarget
BT054293.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   =||-||=||||||||*|||||||| targets:2199   GUG-GCGCACCGGACUGUCCGGUG   2221 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0218B09 mRNA, complete cds	NA	coding protein	psRNATarget
EZ091678.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:12   CUG-GCGCACCGGACUGUCCGGUG   34 Target Full Sequence	2.5	TSA: Zea mays contig27327, mRNA sequence	NA	coding protein	psRNATarget
EZ088459.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:84   CUG-GCGCACCGGACUGUCCGGUG   106 Target Full Sequence	2.5	TSA: Zea mays contig24105, mRNA sequence	NA	coding protein	psRNATarget
HI409730.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:2   CUG-GCGCACCGGACUGUCCGGUG   24 Target Full Sequence	2.5	Sequence 7855 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241860.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:2   CUG-GCGCACCGGACUGUCCGGUG   24 Target Full Sequence	2.5	Sequence 7855 from Patent EP2985353	NA	coding protein	psRNATarget
JB170191.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:2   CUG-GCGCACCGGACUGUCCGGUG   24 Target Full Sequence	2.5	Sequence 7855 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238722.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||**|*||||||=|||||||||| targets:25   AUGCCCCCACCGGGCAGUCCGGUG   48 Target Full Sequence	2.5	Sequence 4717 from Patent EP2985353	NA	coding protein	psRNATarget
JB167053.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||**|*||||||=|||||||||| targets:25   AUGCCCCCACCGGGCAGUCCGGUG   48 Target Full Sequence	2.5	Sequence 4717 from Patent EP2559767	NA	coding protein	psRNATarget
HI406592.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   |||**|*||||||=|||||||||| targets:25   AUGCCCCCACCGGGCAGUCCGGUG   48 Target Full Sequence	2.5	Sequence 4717 from Patent EP2074227	NA	coding protein	psRNATarget
EU948808.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:296   CUG-GCGCACCGGACUGUCCGGUG   318 Target Full Sequence	2.5	Zea mays clone 385792 mRNA sequence	NA	coding protein	psRNATarget
EU948808.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||*|||||||| targets:524   CGGUGUACACCGGACUGUCCGGUG   547 Target Full Sequence	2.5	Zea mays clone 385792 mRNA sequence	NA	coding protein	psRNATarget
BT036301.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||*|||||||| targets:827   CGGUGUACACCGGACUGUCCGGUG   850 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0105P13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176839.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:1272   CUG-GCGCACCGGACUGUCCGGUG   1294 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384275 (LOC100384275), mRNA	NA	coding protein	psRNATarget
BT069667.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   *||-||=||||||||*|||||||| targets:1272   CUG-GCGCACCGGACUGUCCGGUG   1294 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0206D24 mRNA, complete cds	NA	coding protein	psRNATarget
LQ242140.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||*|||||||| targets:117   CGGUGUACACCGGACUGUCCGGUG   140 Target Full Sequence	2.5	Sequence 8135 from Patent EP2985353	NA	coding protein	psRNATarget
HI410010.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||*|||||||| targets:117   CGGUGUACACCGGACUGUCCGGUG   140 Target Full Sequence	2.5	Sequence 8135 from Patent EP2074227	NA	coding protein	psRNATarget
JB170471.1	ncRNA:24   UACUCGUGUGGCCUGUCAGGCCAC   1   **|*|=|||||||||*|||||||| targets:117   CGGUGUACACCGGACUGUCCGGUG   140 Target Full Sequence	2.5	Sequence 8135 from Patent EP2559767	NA	coding protein	psRNATarget