ncRNA ID | osa-miR2866 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:7331600-7331700 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 72 - UCUAGUUUGUGUUCAGCAUC - 91 |
Stem-loop(if miRNA) |
------                               A     -ACUA  ACG       ACCCUUUUUCUCUAGUUUGUGUUCAGCAUCU UGUCA     UG   C       ||||||||||||||||||||||||||||||| |||||     ||       UGGGAAAAAGAGAUCAAACACGAGUCGUAGA ACAGU     AC   U UUAUAC                               C     CAAAC  AAG |
Stem-loop sequence | ACCCUUUUUCUCUAGUUUGUGUUCAGCAUCUAUGUCAACUAUGACGCUGAACACAAACUGACACAGAUGCUGAGCACAAACUAGAGAAAAAGGGUCAUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ235879.1 |
|
1.5 | Sequence 1874 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
HI403749.1 |
|
1.5 | Sequence 1874 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB164210.1 |
|
1.5 | Sequence 1874 from Patent EP2559767 | NA | coding protein | psRNATarget |
1 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |