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BaseInfo

ncRNA ID osa-miR2866
Species Oryza sativa
Class miRNA
Genome position Chr3:7331600-7331700 [-]
Reference genome MSU7
Source miRBase
Length 20
Mature sequence(if miRNA) 72 - UCUAGUUUGUGUUCAGCAUC - 91
Stem-loop(if miRNA) ------                               A     -ACUA  ACG
      ACCCUUUUUCUCUAGUUUGUGUUCAGCAUCU UGUCA     UG   C
      ||||||||||||||||||||||||||||||| |||||     ||
      UGGGAAAAAGAGAUCAAACACGAGUCGUAGA ACAGU     AC   U
UUAUAC                               C     CAAAC  AAG
Stem-loop sequence ACCCUUUUUCUCUAGUUUGUGUUCAGCAUCUAUGUCAACUAUGACGCUGAACACAAACUGACACAGAUGCUGAGCACAAACUAGAGAAAAAGGGUCAUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235879.1
ncRNA:20   CUACGACUUGUGUUUGAUCU   1
  ||||||||=|||||||||||
targets:69   GAUGCUGAGCACAAACUAGA   88

1.5 Sequence 1874 from Patent EP2985353 NA coding protein psRNATarget
HI403749.1
ncRNA:20   CUACGACUUGUGUUUGAUCU   1
  ||||||||=|||||||||||
targets:69   GAUGCUGAGCACAAACUAGA   88

1.5 Sequence 1874 from Patent EP2074227 NA coding protein psRNATarget
JB164210.1
ncRNA:20   CUACGACUUGUGUUUGAUCU   1
  ||||||||=|||||||||||
targets:69   GAUGCUGAGCACAAACUAGA   88

1.5 Sequence 1874 from Patent EP2559767 NA coding protein psRNATarget

Reference

1 PMID:19903869
"Rice MicroRNA effector complexes and targets";
Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y;
Plant Cell. 21:3421-3435(2009).