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BaseInfo

ncRNA ID	novel_zma_miR106
Species	Zea mays
Class	miRNA
Genome position	Chr3:177347568-177347732 [-]
Reference genome	RefGen_v4
Source	SRR2089709
Length	24
Mature sequence(if miRNA)	1 - AGAAUGUAGUUUGAAUAUGGGUAU - 24
Stem-loop(if miRNA)	--                  C               U    --CAAUAC    A            C          AAC  U   ACCUAUAUUCAAACUACA UCUACAAAUAGUGCA UAUA        AACA UGUUUUGGGUGA UAUAUGGGUG   UG U   |||||||||||||||||| ||||||||||||||| ||||        |||| |||||||||||| ||||||||||   || G   UGGGUAUAAGUUUGAUGU AGAUGUUUGUCAUGU AUAU        UUGU ACAAAACCUACU GUAUACUCAC   AC U UA                  A               U    AUCACGUU    C            A          GUU  A
Stem-loop sequence	ACCUAUAUUCAAACUACACUCUACAAAUAGUGCAUUAUACAAUACAACAAUGUUUUGGGUGACUAUAUGGGUGAACUGUUGUACAUUGCACUCAUAUGAUCAUCCAAAACACUGUUUUGCACUAUAUAUUGUACUGUUUGUAGAAUGUAGUUUGAAUAUGGGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020544905.1	ncRNA:24   UAUGGGUAUAAGUUUGAUGUAAGA   1   |||||||||||||||||*|||||| targets:3637   AUACCCAUAUUCAAACUCCAUUCU   3660 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100216781 (LOC100216781), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ100108.1	ncRNA:24   UAUGGGUAUAAGUUUGAUGUAAGA   1   ||||*|||||||||||||=||||| targets:19   AUACACAUAUUCAAACUAUAUUCU   42 Target Full Sequence	1.5	TSA: Zea mays contig35763, mRNA sequence	NA	coding protein	psRNATarget
XM_008672266.2	ncRNA:24   UAUGGGUAUAAGUUUGAUGUAAGA   1   |||=|=||||||||||||||||*| targets:1691   AUAUCUAUAUUCAAACUACAUUGU   1714 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008672265.2	ncRNA:24   UAUGGGUAUAAGUUUGAUGUAAGA   1   |||=|=||||||||||||||||*| targets:1439   AUAUCUAUAUUCAAACUACAUUGU   1462 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X1, mRNA	NA	coding protein	psRNATarget