ncRNA ID | novel_zma_miR104 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:27064853-27064935 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR5451003;SRR5451005;SRR2089699;SRR2089700;SRR2089701;SRR2089703 |
Length | 24 |
Mature sequence(if miRNA) | 60 - ACCUAGAACACUCGGCAAAGACGU - 83 |
Stem-loop(if miRNA) |
--U               GGUC   A             GGU    UCUUUGCCGAGUGUU    GGU GACACUCGGCAAA   A    |||||||||||||||    ||| |||||||||||||   A    AGAAACGGCUCACAA    CCA CUGUGAGCCGUUU   C UGC               -GAU   -             AUU |
Stem-loop sequence | UUCUUUGCCGAGUGUUGGUCGGUAGACACUCGGCAAAGGUAACUUAUUUGCCGAGUGUCACCUAGAACACUCGGCAAAGACGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU974507.1 |
|
0.0 | Zea mays clone 451014 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |