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BaseInfo

ncRNA ID novel_zma_miR104
Species Zea mays
Class miRNA
Genome position Chr3:27064853-27064935 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR5451003;SRR5451005;SRR2089699;SRR2089700;SRR2089701;SRR2089703
Length 24
Mature sequence(if miRNA) 60 - ACCUAGAACACUCGGCAAAGACGU - 83
Stem-loop(if miRNA) --U               GGUC   A             GGU
   UCUUUGCCGAGUGUU    GGU GACACUCGGCAAA   A
   |||||||||||||||    ||| |||||||||||||   A
   AGAAACGGCUCACAA    CCA CUGUGAGCCGUUU   C
UGC               -GAU   -             AUU
Stem-loop sequence UUCUUUGCCGAGUGUUGGUCGGUAGACACUCGGCAAAGGUAACUUAUUUGCCGAGUGUCACCUAGAACACUCGGCAAAGACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU974507.1
ncRNA:24   UGC-A---GAAACGGCUCACAAGAUCCA   1
  |||-|---=|||||||||||||||||||
targets:524   ACGGUGACUUUUGCCGAGUGUUCUAGGU   551

0.0 Zea mays clone 451014 hypothetical protein mRNA, complete cds NA coding protein psRNATarget