Search result

BaseInfo

ncRNA ID novel_zma_miR102
Species Zea mays
Class miRNA
Genome position Chr3:196888676-196888747 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089713;SRR2089714;SRR2089715;SRR2287031;SRR5451003;SRR5451005;SRR5451006;SRR2089698;SRR2089699;SRR2089700;SRR2089702;SRR2089705;SRR2089707;SRR2089708
Length 22
Mature sequence(if miRNA) 51 - CAGCGGGCUGCUGGUUGGCGAU - 72
Stem-loop(if miRNA) --   -      G        C    UUGUGUAC    UUC
  CAG CGGGCU CUGGUUGG GAUG        CUGC   U
  ||| |||||| |||||||| ||||        ||||
  GUC GUCUGA GGCCAGCC CUGC        GGCG   G
AC   A      -        -    -------C    UCA
Stem-loop sequence CAGCGGGCUGCUGGUUGGCGAUGUUGUGUACCUGCUUCUGACUGCGGCCGUCCCGACCGGAGUCUGACUGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945979.1
ncRNA:22   UA--GCGGUUGGUCGUCGGGCGAC   1
  ||--||||||*|||||||||*|||
targets:451   AUGGCGCCAAGCAGCAGCCCCCUG   474

2.5 Zea mays clone 292519 mRNA sequence NA coding protein psRNATarget