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BaseInfo

ncRNA ID	osa-miR1866-5p
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:6510870-6510954 [+]
Reference genome	MSU7
Source	miRBase
Length	24
Mature sequence(if miRNA)	11 - GAGGGAUUUUGCGGGAAUUUCACG - 34
Stem-loop(if miRNA)	-      -C   G                     CG      G  CUUUUG  ACG AGGGAUUUUGCGGGAAUUUCA  GGAAUU A  ||||||  ||| |||||||||||||||||||||  |||||| G  GGAAAC  UGU UUCUUAAAAUGUCCUUAAAGU  CCUUAG U A      CU   G                     --      U
Stem-loop sequence	CUUUUGCACGGAGGGAUUUUGCGGGAAUUUCACGGGAAUUGAGUUGAUUCCUGAAAUUCCUGUAAAAUUCUUGUGUUCCAAAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015781615.1	ncRNA:24   GCACUUUAAGGGCGUUUUAGGGAG   1   =***||=||||||||||||||||| targets:1390   UUAAAAGUUCCCGCAAAAUCCCUC   1413 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335754 (LOC4335754), mRNA	uncharacterized LOC4335754(LOC4335754)	coding protein	psRNATarget
XM_015766063.1	ncRNA:24   GCACUUUA---AGGGCGUUUUAGGGAG   1   ****||||---|||||||||||||||| targets:33   GCACAAAUCAAUCCCGCAAAAUCCCUC   59 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group WPP domain-interacting tail-anchored protein 1-like (LOC107277375), transcript variant X2, mRNA	WPP domain-interacting tail-anchored protein 1-like(LOC107277375)	coding protein	psRNATarget

Reference

1	PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008).
2	PMID:19103661 "Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009).