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BaseInfo

ncRNA ID novel_zma_miR95
Species Zea mays
Class miRNA
Genome position Chr3:213764841-213764965 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2287163;SRR2939884;SRR3341856;SRR4237220;SRR4237221;SRR4237224;SRR4237225
Length 21
Mature sequence(if miRNA) 105 - UUUGUUAAUGUUUGGAGUAGC - 125
Stem-loop(if miRNA) --                     G          UUUAAAAUC    G    -    GU  CCUGGUG
  UUUGUUAAUGUUUGGAGUAGC CCGUCAAAGG         UGCA UAGU CCUG  AG       G
  ||||||||||||||||||||| ||||||||||         |||| |||| ||||  ||       C
  AAACAAUUACAAACCUCAUCG GGUAGUUUCU         GUGU GUCA GGGC  AC       U
UA                     G          ---------    G    A    --  AAAGGUU
Stem-loop sequence UUUGUUAAUGUUUGGAGUAGCGCCGUCAAAGGUUUAAAAUCUGCAGUAGUCCUGGUAGCCUGGUGGCUUUGGAAACACGGGAACUGGUGUGUCUUUGAUGGGGCUACUCCAAACAUUAACAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ089975.1
ncRNA:21   CGAUGAGGUUUGUAAUUGUUU   1
  |||*|*|||||||||||||||
targets:24   GCUUCACCAAACAUUAACAAA   44

2.0 TSA: Zea mays contig25621, mRNA sequence NA coding protein psRNATarget
BT084216.1
ncRNA:21   CGAUGAGGUUUGUAAUUGUUU   1
  ***|*||||||||||||||||
targets:1074   CAAAAUCCAAACAUUAACAAA   1094

2.0 Zea mays full-length cDNA clone ZM_BFb0090D11 mRNA, complete cds NA coding protein psRNATarget