ncRNA ID | novel_zma_miR95 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:213764841-213764965 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2287163;SRR2939884;SRR3341856;SRR4237220;SRR4237221;SRR4237224;SRR4237225 |
Length | 21 |
Mature sequence(if miRNA) | 105 - UUUGUUAAUGUUUGGAGUAGC - 125 |
Stem-loop(if miRNA) |
--                     G          UUUAAAAUC    G    -    GU  CCUGGUG   UUUGUUAAUGUUUGGAGUAGC CCGUCAAAGG         UGCA UAGU CCUG  AG       G   ||||||||||||||||||||| ||||||||||         |||| |||| ||||  ||       C   AAACAAUUACAAACCUCAUCG GGUAGUUUCU         GUGU GUCA GGGC  AC       U UA                     G          ---------    G    A    --  AAAGGUU |
Stem-loop sequence | UUUGUUAAUGUUUGGAGUAGCGCCGUCAAAGGUUUAAAAUCUGCAGUAGUCCUGGUAGCCUGGUGGCUUUGGAAACACGGGAACUGGUGUGUCUUUGAUGGGGCUACUCCAAACAUUAACAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ089975.1 |
|
2.0 | TSA: Zea mays contig25621, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT084216.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0090D11 mRNA, complete cds | NA | coding protein | psRNATarget |