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BaseInfo

ncRNA ID novel_zma_miR92
Species Zea mays
Class miRNA
Genome position Chr3:220804485-220804605 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AGUGUUCGGCACUCGGCAAAGACU - 24
Stem-loop(if miRNA) --               -          -------- -           -  AA   CCA  AG U
  UCUUUGCCGAGUGCC AACGCUCGGC        C CUCGGCAAAGG UU  CAG   UC  C C
  ||||||||||||||| ||||||||||        | ||||||||||| ||  |||   ||  |
  AGAAACGGCUCACGG UUGUGAGCCG        G GAGCCGUUUCC AG  GUC   AG  G U
UC               C          UUUCCGCC C           C  CA   ACC  CA A
Stem-loop sequence UCUUUGCCGAGUGCCAACGCUCGGCCCUCGGCAAAGGUUAACAGCCAUCAGCUCUAGACGACCACUGACGACCCUUUGCCGAGCGCCGCCUUUGCCGAGUGUUCGGCACUCGGCAAAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406962.1
ncRNA:24   UC---AGAAACGGCUCACGGCUUGUGA   1
  ||---||||||||||||||||||=|||
targets:15   AGGCUUCUUUGCCGAGUGCCGAAUACU   41

1.5 Sequence 5087 from Patent EP2074227 NA coding protein psRNATarget
LQ239092.1
ncRNA:24   UC---AGAAACGGCUCACGGCUUGUGA   1
  ||---||||||||||||||||||=|||
targets:15   AGGCUUCUUUGCCGAGUGCCGAAUACU   41

1.5 Sequence 5087 from Patent EP2985353 NA coding protein psRNATarget
JB167423.1
ncRNA:24   UC---AGAAACGGCUCACGGCUUGUGA   1
  ||---||||||||||||||||||=|||
targets:15   AGGCUUCUUUGCCGAGUGCCGAAUACU   41

1.5 Sequence 5087 from Patent EP2559767 NA coding protein psRNATarget