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BaseInfo

ncRNA ID novel_zma_miR91
Species Zea mays
Class miRNA
Genome position Chr3:220944439-220944490 [-]
Reference genome RefGen_v4
Source SRR2089709
Length 24
Mature sequence(if miRNA) 29 - AGGUUAGCCUCGGGCGAGACGGAA - 52
Stem-loop(if miRNA) --               --    C GA
  AGGUUAGCCUCGGGC  GAGA G  A
  |||||||||||||||  |||| |
  UCCGGUUGGAGCCUG  CUCU C  C
GC               UC    A AA
Stem-loop sequence AGGUUAGCCUCGGGCGAGACGGAACAACAUCUCCUGUCCGAGGUUGGCCUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008661501.2
ncRNA:24   AAG-GCAGAGCGGGCUCCGAUUGGA   1
  *||-||*||||||||||||||||||
targets:2916   GUCACGGCUCGCCCGAGGCUAACCU   2940

1.0 PREDICTED: Zea mays protein ALP1-like (LOC103638649), mRNA NA coding protein psRNATarget
NM_001348352.1
ncRNA:24   AAG-GCAGAGCGGGCUCCGAUUGGA   1
  |||-||*||||||||||||*|||||
targets:360   UUCACGGCUCGCCCGAGGCCAACCU   384

2.5 Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA NA coding protein psRNATarget