Search result

BaseInfo

ncRNA ID	novel_zma_miR85
Species	Zea mays
Class	miRNA
Genome position	Chr3:228555871-228555924 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR1997865;SRR5451005
Length	24
Mature sequence(if miRNA)	31 - GGUGGAUGAUGAGCUAGACGACGU - 54
Stem-loop(if miRNA)	--  U G  G UG G   -       UG   GG G AU A  A CUA GACGACG  A   || | || |  | ||| |||||||   CC C UA U  U GAU CUGCUGC  U GA  - G  G GU G   A       UU
Stem-loop sequence	GGUGGAUGAUGAGCUAGACGACGUGAUUUCGUCGUCAUAGGUUGUGAUGCCCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020543898.1	ncRNA:24   UGCAGCAGAUCGAGUAGUAGGUGG   1   |||*||||*||||||||||||||| targets:344   ACGCCGUCCAGCUCAUCAUCCACC   367 Target Full Sequence	1.0	PREDICTED: Zea mays oral cancer-overexpressed protein 1 homolog (LOC103639445), transcript variant X4, mRNA	NA	coding protein	psRNATarget
EU952646.1	ncRNA:24   UGCAGCAGAUCGAGUAGUAGGUGG   1   |||*||||*||||||||=|||||| targets:591   ACGCCGUCCAGCUCAUCGUCCACC   614 Target Full Sequence	2.5	Zea mays clone 1285286 mRNA sequence	NA	coding protein	psRNATarget
XM_020551972.1	ncRNA:24   UGCAGCAGAUCGAGUAGUAGGUGG   1   |||*=|||*||||||||=|||||| targets:1222   ACGCUGUCGAGCUCAUCGUCCACC   1245 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109945661 (LOC109945661), mRNA	NA	coding protein	psRNATarget