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BaseInfo

ncRNA ID novel_zma_miR83
Species Zea mays
Class miRNA
Genome position Chr3:231933677-231933779 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089711
Length 24
Mature sequence(if miRNA) 1 - GAUAGUCGUCUAGAGGGGGGUGAA - 24
Stem-loop(if miRNA) --           U    -UG   --U  CGACAUCACUUCGAGCGGUUAGGC
  CAUCUCCUUCU GGCG   AUC   CC                        U
  ||||||||||| ||||   |||   ||
  GUGGGGGGAGA CUGC   UAG   AC                        C
AA           U    UGA   UUA  CAUAGUCUCGGGCCACGAAGUAAU
Stem-loop sequence CAUCUCCUUCUUGGCGUGAUCUCCCGACAUCACUUCGAGCGGUUAGGCUCUAAUGAAGCACCGGGCUCUGAUACCAAUUGAUAGUCGUCUAGAGGGGGGUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT018487.1
ncRNA:24   AAGUGGGGGGAGAUCUGCUGAUAG   1
  |||||||||||||||=||||||||
targets:404   UUCACCCCCCUCUAGGCGACUAUC   427

1.5 Zea mays clone EL01N0424F04.d mRNA sequence NA coding protein psRNATarget