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BaseInfo

ncRNA ID novel_zma_miR81
Species Zea mays
Class miRNA
Genome position Chr3:216140818-216140902 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2287031;SRR5451003;SRR2089698;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089706;SRR2089707;SRR2089708
Length 21
Mature sequence(if miRNA) 1 - AUCGAAUGAGAUUGGGGGGAU - 21
Stem-loop(if miRNA) --      U A         -          UC     U   A
  AUCGAA G GAUUGGGGG GAUUAAAUCU  UUCUA UCA U
  |||||| | ||||||||| ||||||||||  ||||| |||
  UAGCUU C CUAACCUCC CUAAUUUAGA  AGGAU AGU U
CC      C C         U          GA     C   U
Stem-loop sequence AUCGAAUGAGAUUGGGGGGAUUAAAUCUUCUUCUAUUCAAUUUUGACUAGGAAGAGAUUUAAUCUCCUCCAAUCCCCUUCGAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069231.2
ncRNA:21   UAGGGGGGUUAGAGUAAGCUA   1
  |||||||||||||||||||||
targets:1056   AUCCCCCCAAUCUCAUUCGAU   1076

0.0 Zea mays full-length cDNA clone ZM_BFb0366D18 mRNA, complete cds NA coding protein psRNATarget