ncRNA ID | novel_zma_miR72 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:169458881-169458975 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR5451003;SRR5451004;SRR5451006;SRR2089698;SRR2089702;SRR2089703;SRR2089704;SRR2089705;SRR2089706;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 72 - AAACUCUGAGUGGAGCAGCUCUGC - 95 |
Stem-loop(if miRNA) |
--             C     A  -----      G     --   AU      AGAGUUGCUCCAC UAGAG UU     UAGGGC UGUUU  GGU  GGCU   ||||||||||||| ||||| ||     |||||| |||||  |||  |||C   UCUCGACGAGGUG GUCUC AA     AUCUCG ACGAG  CCA  UCGU CG             A     A  ACUUC      -     AC   CC    |
Stem-loop sequence | AGAGUUGCUCCACCUAGAGAUUUAGGGCGUGUUUGGUAUGGCUCUGCUCCACCCAGAGCAGCUCUACUUCAAAACUCUGAGUGGAGCAGCUCUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT084823.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0187L14 mRNA, complete cds | NA | coding protein | psRNATarget |