ncRNA ID | novel_zma_miR70 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:153032669-153032760 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089713;SRR2089715;SRR4237221;SRR4237223;SRR4237224;SRR4237225;SRR5099742;SRR5100248;SRR5100255;SRR5105959;SRR5105961 |
Length | 21 |
Mature sequence(if miRNA) | 72 - UUCUGGAGGGGAUUUGAGUUU - 92 |
Stem-loop(if miRNA) |
--                 U        U          AG   GC   ACUCAAAUCCCUUCCGG AUUGGAGG GAUUGAGGGG  AAU  A   ||||||||||||||||| |||||||| ||||||||||  |||   UGAGUUUAGGGGAGGUC UAAUCUCC CUAACUCCUU  UUA  A UU                 U        U          CU   AU |
Stem-loop sequence | ACUCAAAUCCCUUCCGGUAUUGGAGGUGAUUGAGGGGAGAAUGCAAUAAUUUCUUCCUCAAUCUCCUCUAAUUCUGGAGGGGAUUUGAGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020545649.1 |
|
1.5 | PREDICTED: Zea mays zinc finger BED domain-containing protein DAYSLEEPER-like (LOC109942989), transcript variant X5, mRNA | NA | coding protein | psRNATarget |