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BaseInfo

ncRNA ID novel_zma_miR57
Species Zea mays
Class miRNA
Genome position Chr3:30225900-30226078 [-]
Reference genome RefGen_v4
Source SRR1583943;SRR1583944;SRR1583941;SRR1583942
Length 22
Mature sequence(if miRNA) 158 - AGUCUUCGCGAUAGACAUCGGG - 179
Stem-loop(if miRNA) --     -      U    -A       ------ UUUU      - UG UGUGCUUAGUCCGGCUGCACCCUUAGGCGACUUUUGCGCGGAUAGUC
  AGUCU UCGCGA AGAC  UCGGGUU      U    UCGCAC U  U                                               U
  ||||| |||||| ||||  |||||||      |    |||||| |  |                                               U
  UCAGA GGCGCU UCUG  AGGCGUG      G    CGGAUU C  C                                               C
CU     U      -    AU       UUUUCA ----      C -- ACGUCGGCCUGAUUCGUGUUGUUCACGCUUUUUAGCUUCAGAUGGCG
Stem-loop sequence AGUCUUCGCGAUAGACAUCGGGUUUUUUUUCGCACUUGUUGUGCUUAGUCCGGCUGCACCCUUAGGCGACUUUUGCGCGGAUAGUCUUCGCGGUAGACUUCGAUUUUUCGCACUUGUUGUGCUUAGUCCGGCUGCACCCUUAGGCGACUUUUGUGCGGAUAGUCUUCGCGGUAGACUUC