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BaseInfo

ncRNA ID novel_zma_miR52
Species Zea mays
Class miRNA
Genome position Chr2:12540858-12540923 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089714;SRR2089715;SRR2287159;SRR2287165;SRR5451003;SRR2089698;SRR2089703;SRR2089706;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 43 - GUUUCUUUUUAUUUGUCGCUGGUU - 66
Stem-loop(if miRNA) --                      U     CAA
  GUUUCUUUUUAUUUGUCGCUGG UAGUG   U
  |||||||||||||||||||||| |||||
  CAAAGAAAAAUAAACAGCGACC AUCAC   U
GG                      U     AUU
Stem-loop sequence GUUUCUUUUUAUUUGUCGCUGGUUAGUGCAAUUUUACACUAUCCAGCGACAAAUAAAAAGAAACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410015.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
LQ242145.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
JB169079.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
LQ240748.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
JB170476.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
HI408618.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
LQ235531.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:61   AUCCAGCGACAAAUAAAAAGAAAC   84

0.0 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
JB163862.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:61   AUCCAGCGACAAAUAAAAAGAAAC   84

0.0 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
HI403401.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:61   AUCCAGCGACAAAUAAAAAGAAAC   84

0.0 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
EZ061437.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:218   AUCCAGCGACAAAUAAAAAGAAAC   241

0.0 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
BT060817.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:280   AUCCAGCGACAAAUAAAAAGAAAC   303

0.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:1216   AUCCAGCGACAAAUAAAAAGAAAC   1239

0.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:1338   AUCCAGCGACAAAUAAAAAGAAAC   1361

0.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:1338   AUCCAGCGACAAAUAAAAAGAAAC   1361

0.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:191   AUCCAGCGACAAAUAAAAAGAAAC   214

0.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:1405   AUCCAGCGACAAAUAAAAAGAAAC   1428

0.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:1322   AUCCAGCGACAAAUAAAAAGAAAC   1345

0.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:1577   AUCCAGCGACAAAUAAAAAGAAAC   1600

0.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:1593   AUCCAGCGACAAAUAAAAAGAAAC   1616

0.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:2050   AUCCAGCGACAAAUAAAAAGAAAC   2073

0.0 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:2546   AUCCAGCGACAAAUAAAAAGAAAC   2569

0.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:2846   AUCCAGCGACAAAUAAAAAGAAAC   2869

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:2863   AUCCAGCGACAAAUAAAAAGAAAC   2886

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:2969   AUCCAGCGACAAAUAAAAAGAAAC   2992

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||||||||
targets:3748   AUCCAGCGACAAAUAAAAAGAAAC   3771

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
LQ235495.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |=||||||||*|||||||||||||
targets:57   AGCCAGCGACUAAUAAAAAGAAAC   80

1.0 Sequence 1490 from Patent EP2985353 NA coding protein psRNATarget
LQ235495.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  *==|||||||*|||||||||||||
targets:31   UGUCAGCGACUAAUAAAAAGAAAC   54

1.0 Sequence 1490 from Patent EP2985353 NA coding protein psRNATarget
JB163826.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |=||||||||*|||||||||||||
targets:57   AGCCAGCGACUAAUAAAAAGAAAC   80

1.0 Sequence 1490 from Patent EP2559767 NA coding protein psRNATarget
JB163826.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  *==|||||||*|||||||||||||
targets:31   UGUCAGCGACUAAUAAAAAGAAAC   54

1.0 Sequence 1490 from Patent EP2559767 NA coding protein psRNATarget
HI403365.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |=||||||||*|||||||||||||
targets:57   AGCCAGCGACUAAUAAAAAGAAAC   80

1.0 Sequence 1490 from Patent EP2074227 NA coding protein psRNATarget
HI403365.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  *==|||||||*|||||||||||||
targets:31   UGUCAGCGACUAAUAAAAAGAAAC   54

1.0 Sequence 1490 from Patent EP2074227 NA coding protein psRNATarget
JB169406.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
LQ241829.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||=|||||||||||
targets:54   AUCCAGCGACAAGUAAAAAGAAAC   77

1.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
LQ242091.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI409699.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||=|||||||||||
targets:54   AUCCAGCGACAAGUAAAAAGAAAC   77

1.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ241075.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
JB170160.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||=|||||||||||
targets:54   AUCCAGCGACAAGUAAAAAGAAAC   77

1.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
HI408945.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77

0.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
JB163740.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|||||||||||||||||||||=
targets:61   AUCCAGCGACAAAUAAAAAGAAAU   84

1.0 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|||||||||||||||||||||=
targets:61   AUCCAGCGACAAAUAAAAAGAAAU   84

1.0 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
LQ235409.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|||||||||||||||||||||=
targets:61   AUCCAGCGACAAAUAAAAAGAAAU   84

1.0 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
EU964901.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:547   AUUCAGCGACAAAUAAAAAGAAAC   570

0.0 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:619   AUUCAGCGACAAAUAAAAAGAAAC   642

0.0 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||||||||
targets:619   AUUCAGCGACAAAUAAAAAGAAAC   642

0.0 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088136.1
ncRNA:24   UUG-GUCGCUGUUUAUUUUUCUUUG   1
  =|=-|||||||||||||||||||||
targets:803   GAUACAGCGACAAAUAAAAAGAAAC   827

0.0 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
NM_001196908.1
ncRNA:24   UUG-GUCGCUGUUUAUUUUUCUUUG   1
  =|=-|||||||||||||||||||||
targets:803   GAUACAGCGACAAAUAAAAAGAAAC   827

0.0 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  ||==||||||*|||||||||||||
targets:231   AAUUAGCGACUAAUAAAAAGAAAC   254

1.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
EU970288.1
ncRNA:24   UU-GGUCGCUGUUUAUUUUUCUUUG   1
  ||-||||||||*|||||||||||||
targets:1372   AAUCCAGCGACUAAUAAAAAGAAAC   1396

1.0 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
HI409616.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=|||||||||||||||||||*
targets:54   AUCUAGCGACAAAUAAAAAGAAAG   77

1.0 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
JB170077.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=|||||||||||||||||||*
targets:54   AUCUAGCGACAAAUAAAAAGAAAG   77

1.0 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
LQ241746.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=|||||||||||||||||||*
targets:54   AUCUAGCGACAAAUAAAAAGAAAG   77

1.0 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
XM_008667486.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  *|=|||||||||*|||||||||||
targets:1382   UAUCAGCGACAACUAAAAAGAAAC   1405

1.5 PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA NA coding protein psRNATarget
LQ235469.1
ncRNA:24   UU---GGUCGCUGUUUAUUUUUCUUUG   1
  ||---||||||||*|||||||||||||
targets:36   AAUUCCCAGCGACUAAUAAAAAGAAAC   62

1.0 Sequence 1464 from Patent EP2985353 NA coding protein psRNATarget
HI403339.1
ncRNA:24   UU---GGUCGCUGUUUAUUUUUCUUUG   1
  ||---||||||||*|||||||||||||
targets:36   AAUUCCCAGCGACUAAUAAAAAGAAAC   62

1.0 Sequence 1464 from Patent EP2074227 NA coding protein psRNATarget
JB163800.1
ncRNA:24   UU---GGUCGCUGUUUAUUUUUCUUUG   1
  ||---||||||||*|||||||||||||
targets:36   AAUUCCCAGCGACUAAUAAAAAGAAAC   62

1.0 Sequence 1464 from Patent EP2559767 NA coding protein psRNATarget
LQ235202.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:43   AUCCAGCGACAACUAAAAAGAAAC   66

1.5 Sequence 1197 from Patent EP2985353 NA coding protein psRNATarget
HI403072.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:43   AUCCAGCGACAACUAAAAAGAAAC   66

1.5 Sequence 1197 from Patent EP2074227 NA coding protein psRNATarget
JB163533.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:43   AUCCAGCGACAACUAAAAAGAAAC   66

1.5 Sequence 1197 from Patent EP2559767 NA coding protein psRNATarget
JB163828.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1492 from Patent EP2559767 NA coding protein psRNATarget
HI403313.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1438 from Patent EP2074227 NA coding protein psRNATarget
JB163774.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1438 from Patent EP2559767 NA coding protein psRNATarget
LQ235497.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1492 from Patent EP2985353 NA coding protein psRNATarget
LQ235443.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1438 from Patent EP2985353 NA coding protein psRNATarget
LQ235504.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1499 from Patent EP2985353 NA coding protein psRNATarget
JB163835.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1499 from Patent EP2559767 NA coding protein psRNATarget
HI403367.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1492 from Patent EP2074227 NA coding protein psRNATarget
HI403374.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1499 from Patent EP2074227 NA coding protein psRNATarget
HI409551.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:46   AUCCAGCGACAACUAAAAAGAAAC   69

1.5 Sequence 7676 from Patent EP2074227 NA coding protein psRNATarget
JB170012.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:46   AUCCAGCGACAACUAAAAAGAAAC   69

1.5 Sequence 7676 from Patent EP2559767 NA coding protein psRNATarget
LQ241681.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:46   AUCCAGCGACAACUAAAAAGAAAC   69

1.5 Sequence 7676 from Patent EP2985353 NA coding protein psRNATarget
LQ237972.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:47   AUCCAGCGACUAAUAAAAAGAAAC   70

1.0 Sequence 3967 from Patent EP2985353 NA coding protein psRNATarget
HI405842.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:47   AUCCAGCGACUAAUAAAAAGAAAC   70

1.0 Sequence 3967 from Patent EP2074227 NA coding protein psRNATarget
JB166303.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:47   AUCCAGCGACUAAUAAAAAGAAAC   70

1.0 Sequence 3967 from Patent EP2559767 NA coding protein psRNATarget
HI405824.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:50   AUCCAGCGACUAAUAAAAAGAAAC   73

1.0 Sequence 3949 from Patent EP2074227 NA coding protein psRNATarget
JB166285.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:50   AUCCAGCGACUAAUAAAAAGAAAC   73

1.0 Sequence 3949 from Patent EP2559767 NA coding protein psRNATarget
LQ237954.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:50   AUCCAGCGACUAAUAAAAAGAAAC   73

1.0 Sequence 3949 from Patent EP2985353 NA coding protein psRNATarget
JB169695.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:53   AUCCAGCGACAACUAAAAAGAAAC   76

1.5 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
LQ241364.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:53   AUCCAGCGACAACUAAAAAGAAAC   76

1.5 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
HI409234.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:53   AUCCAGCGACAACUAAAAAGAAAC   76

1.5 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
HI407324.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:56   AUCCAGCGACAACUAAAAAGAAAC   79

1.5 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:56   AUCCAGCGACAACUAAAAAGAAAC   79

1.5 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
JB167785.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:56   AUCCAGCGACAACUAAAAAGAAAC   79

1.5 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
LQ235499.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|||*||||||||||||||||||
targets:61   AUCCAACGACAAAUAAAAAGAAAC   84

1.0 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|||*||||||||||||||||||
targets:61   AUCCAACGACAAAUAAAAAGAAAC   84

1.0 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
JB163830.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|||*||||||||||||||||||
targets:61   AUCCAACGACAAAUAAAAAGAAAC   84

1.0 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
EZ089411.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:357   AUCCAGCGACAACUAAAAAGAAAC   380

1.5 TSA: Zea mays contig25057, mRNA sequence NA coding protein psRNATarget
XM_008664463.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:143   AUCCAGCGACUAAUAAAAAGAAAC   166

1.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
BT062468.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:621   AUCCAGCGACAACUAAAAAGAAAC   644

1.5 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
NM_001328133.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:814   AUCCAGCGACUAAUAAAAAGAAAC   837

1.0 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
BT070166.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:814   AUCCAGCGACUAAUAAAAAGAAAC   837

1.0 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
XM_008675381.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:1265   AUCCAGCGACUAAUAAAAAGAAAC   1288

1.0 PREDICTED: Zea mays probable WRKY transcription factor 48 (LOC103649650), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:1212   AUCCAGCGACAACUAAAAAGAAAC   1235

1.5 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
BT043433.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  ||**||||||||||||||||||||
targets:1395   AAGAAGCGACAAAUAAAAAGAAAC   1418

0.0 Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:1565   AUCCAGCGACAACUAAAAAGAAAC   1588

1.5 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:1565   AUCCAGCGACAACUAAAAAGAAAC   1588

1.5 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:1201   AUCCAGCGACAACUAAAAAGAAAC   1224

1.5 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669400.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:1650   AUCCAGCGACUAAUAAAAAGAAAC   1673

1.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008656936.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:214   AUCCAGCGACUAAUAAAAAGAAAC   237

1.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008675770.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:1858   AUCCAGCGACUAAUAAAAAGAAAC   1881

1.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:2025   AUCCAGCGACUAAUAAAAAGAAAC   2048

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:2092   AUCCAGCGACUAAUAAAAAGAAAC   2115

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||*|||||||||||
targets:2578   AUCCAGCGACAACUAAAAAGAAAC   2601

1.5 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|||*||||||||||||||||||
targets:2485   AUCCAACGACAAAUAAAAAGAAAC   2508

1.0 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||*|||||||||||||||||||
targets:1513   AUCCUGCGACAAAUAAAAAGAAAC   1536

0.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_008679695.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||*|||||
targets:307   AUCCAGCGACAAAUAAAACGAAAC   330

1.5 PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020552423.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||||||||||*|||||
targets:306   AUCCAGCGACAAAUAAAACGAAAC   329

1.5 PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X5, mRNA NA coding protein psRNATarget
XM_008664460.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||*|||||||||||||
targets:163   AUCCAGCGACUAAUAAAAAGAAAC   186

1.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
JB167691.1
ncRNA:24   UUG----GUCGCUGUUUAUUUUUCUUUG   1
  |||----|||||||||*|||||||||||
targets:52   AACUAUUCAGCGACAACUAAAAAGAAAC   79

1.5 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   UUG----GUCGCUGUUUAUUUUUCUUUG   1
  |||----|||||||||*|||||||||||
targets:52   AACUAUUCAGCGACAACUAAAAAGAAAC   79

1.5 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
HI407230.1
ncRNA:24   UUG----GUCGCUGUUUAUUUUUCUUUG   1
  |||----|||||||||*|||||||||||
targets:52   AACUAUUCAGCGACAACUAAAAAGAAAC   79

1.5 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
JB163846.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=||||||*|||||||||||||
targets:45   AUCUAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1510 from Patent EP2559767 NA coding protein psRNATarget
HI403385.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=||||||*|||||||||||||
targets:45   AUCUAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1510 from Patent EP2074227 NA coding protein psRNATarget
LQ235515.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=||||||*|||||||||||||
targets:45   AUCUAGCGACUAAUAAAAAGAAAC   68

1.0 Sequence 1510 from Patent EP2985353 NA coding protein psRNATarget
LQ237960.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=||||||*|||||||||||||
targets:50   AUCUAGCGACUAAUAAAAAGAAAC   73

1.0 Sequence 3955 from Patent EP2985353 NA coding protein psRNATarget
HI405830.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=||||||*|||||||||||||
targets:50   AUCUAGCGACUAAUAAAAAGAAAC   73

1.0 Sequence 3955 from Patent EP2074227 NA coding protein psRNATarget
JB166291.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*|=||||||*|||||||||||||
targets:50   AUCUAGCGACUAAUAAAAAGAAAC   73

1.0 Sequence 3955 from Patent EP2559767 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||*|||||
targets:54   AUUCAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
JB169789.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||*|||||
targets:54   AUUCAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
HI409328.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||||||||*|||||
targets:54   AUUCAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
BT037092.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||=|||*|||||||||||||
targets:1134   AUCCAGUGACUAAUAAAAAGAAAC   1157

2.0 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
NM_001143050.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||=|||*|||||||||||||
targets:1134   AUCCAGUGACUAAUAAAAAGAAAC   1157

2.0 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
NM_001153573.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||=|*|||||||||||
targets:1196   AUCCAGCGACGAUUAAAAAGAAAC   1219

2.5 Zea mays protein binding protein (LOC100280655), mRNA NA coding protein psRNATarget
EU953133.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||||||=|*|||||||||||
targets:1196   AUCCAGCGACGAUUAAAAAGAAAC   1219

2.5 Zea mays clone 1385620 protein binding protein mRNA, complete cds NA coding protein psRNATarget
XM_008656230.2
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*=|||||||||*|||||||||||
targets:37   AUUCAGCGACAACUAAAAAGAAAC   60

1.5 PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||=|||*|||||||||||||
targets:3191   AUCCAGUGACUAAUAAAAAGAAAC   3214

2.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020544902.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*||||=|||*|||||||||||||
targets:3200   AUCCAGUGACUAAUAAAAAGAAAC   3223

2.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
HI409683.1
ncRNA:24   UUG----GUCGCUGUUUAUUUUUCUUUG   1
  |||----||||||=||*|||||||||||
targets:42   AACUAUUCAGCGAUAACUAAAAAGAAAC   69

2.5 Sequence 7808 from Patent EP2074227 NA coding protein psRNATarget
LQ241813.1
ncRNA:24   UUG----GUCGCUGUUUAUUUUUCUUUG   1
  |||----||||||=||*|||||||||||
targets:42   AACUAUUCAGCGAUAACUAAAAAGAAAC   69

2.5 Sequence 7808 from Patent EP2985353 NA coding protein psRNATarget
JB170144.1
ncRNA:24   UUG----GUCGCUGUUUAUUUUUCUUUG   1
  |||----||||||=||*|||||||||||
targets:42   AACUAUUCAGCGAUAACUAAAAAGAAAC   69

2.5 Sequence 7808 from Patent EP2559767 NA coding protein psRNATarget
JB170657.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*==||||||||||||||*|||||
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
JB169031.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |**|||||||||||||||||||*|
targets:54   AUNCAGCGACAAAUAAAAAGAACC   77

1.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
JB169171.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*==||||||||||||||*|||||
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
HI408570.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |**|||||||||||||||||||*|
targets:54   AUNCAGCGACAAAUAAAAAGAACC   77

1.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
HI408710.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*==||||||||||||||*|||||
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
LQ240700.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |**|||||||||||||||||||*|
targets:54   AUNCAGCGACAAAUAAAAAGAACC   77

1.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*==||||||||||||||*|||||
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*==||||||||||||||*|||||
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  |*==||||||||||||||*|||||
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

1.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
EU965986.1
ncRNA:24   UUGGUCGCUGUUUAUUUUUCUUUG   1
  ||||-||||=|||||||||*||||
targets:814   AACC-GCGAUAAAUAAAAAAAAAC   836

2.5 Zea mays clone 290591 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
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