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BaseInfo

ncRNA ID	novel_zma_miR50
Species	Zea mays
Class	miRNA
Genome position	Chr2:14852914-14852978 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089712;SRR2089713;SRR2287159;SRR2287164;SRR2287165;SRR2089701;SRR2089705;SRR2089706
Length	24
Mature sequence(if miRNA)	1 - UCGGUUAGGGGUGGAUUGAUGGGG - 24
Stem-loop(if miRNA)	--  U                          C   CC UCAAUCCACCCCUAAUCGAACAAGUU U   || |||||||||||||||||||||||||| A   GG AGUUAGGUGGGGAUUGGCUUGUUCAG A GG  U                          A
Stem-loop sequence	CCUUCAAUCCACCCCUAAUCGAACAAGUUCUAAAGACUUGUUCGGUUAGGGGUGGAUUGAUGGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552749.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   ||||*||||||||||||||||||| targets:3284   CCCCCUCAAUCCACCCCUAACCGA   3307 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
XM_008661613.2	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   |||=*||||||||||||||||||| targets:3052   CCCUCUCAAUCCACCCCUAACCGA   3075 Target Full Sequence	0.0	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008661611.2	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   |||=*||||||||||||||||||| targets:3057   CCCUCUCAAUCCACCCCUAACCGA   3080 Target Full Sequence	0.0	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020552750.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   |||=*||||||||||=|||||||| targets:150   CCCUCUCAAUCCACCUCUAACCGA   173 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103654238 (LOC103654238), mRNA	NA	coding protein	psRNATarget
BT017648.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   ==||-||||||||||||||||||| targets:224   UUCC-UCAAUCCACCCCUAACCGA   246 Target Full Sequence	0.0	Zea mays clone EL01N0439D04.c mRNA sequence	NA	coding protein	psRNATarget
BT083705.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   =|=|||=|||||||||*||||||| targets:1856   UCUCAUUAAUCCACCCAUAACCGA   1879 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0030D06 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001350330.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   =|=|||=|||||||||*||||||| targets:5664   UCUCAUUAAUCCACCCAUAACCGA   5687 Target Full Sequence	2.5	Zea mays uncharacterized LOC100191405 (LOC100191405), mRNA	NA	coding protein	psRNATarget
BT069484.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   |==|-|||||||||||||||=||| targets:1176   CUUC-UCAAUCCACCCCUAAUCGA   1198 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0143K13 mRNA, complete cds	NA	coding protein	psRNATarget
BT018770.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   |==|-|||||||||||||||=||| targets:1313   CUUC-UCAAUCCACCCCUAAUCGA   1335 Target Full Sequence	1.5	Zea mays clone EL01N0525C10.d mRNA sequence	NA	coding protein	psRNATarget
NM_001155558.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   ||||-||||||||||||||*|||| targets:1113   CCCC-UCAAUCCACCCCUAUCCGA   1135 Target Full Sequence	1.5	Zea mays 6b-interacting protein 1 (LOC100282650), mRNA	NA	coding protein	psRNATarget
EU961775.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   ||||-||||||||||||||*|||| targets:1113   CCCC-UCAAUCCACCCCUAUCCGA   1135 Target Full Sequence	1.5	Zea mays clone 238196 6b-interacting protein 1 mRNA, complete cds	NA	coding protein	psRNATarget
EU965598.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   |==|-|||||||||||||||=||| targets:1365   CUUC-UCAAUCCACCCCUAAUCGA   1387 Target Full Sequence	1.5	Zea mays clone 287294 calcineurin B-like protein 4 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156604.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   |==|-|||||||||||||||=||| targets:1365   CUUC-UCAAUCCACCCCUAAUCGA   1387 Target Full Sequence	1.5	Zea mays calcineurin B-like2 (si496006g11), mRNA	NA	coding protein	psRNATarget
EU943186.1	ncRNA:24   GGGGUAGUUAGGUGGGGAUUGGCU   1   ||||-||*|||||=|||||||||| targets:1232   CCCC-UCCAUCCAUCCCUAACCGA   1254 Target Full Sequence	2.5	Zea mays clone 1582065 mRNA sequence	NA	coding protein	psRNATarget