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BaseInfo

ncRNA ID novel_zma_miR49
Species Zea mays
Class miRNA
Genome position Chr2:15980415-15980504 [-]
Reference genome RefGen_v4
Source SRR2089709
Length 24
Mature sequence(if miRNA) 1 - AAAAAGAAACGGAGGGAGUAUAUU - 24
Stem-loop(if miRNA) --A                                       CAA
   AUACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUG   U
   |||||||||||||||||||||||||||||||||||||||
   UAUGAGGGAGGCAAAGAAAAAUAAACAGCGACCUAUCAC   U
UUA                                       AUU
Stem-loop sequence AAUACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUGCAAUUUUACACUAUCCAGCGACAAAUAAAAAGAAACGGAGGGAGUAUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU957018.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |||||||||||||=||||||||||
targets:1996   AAUAUACUCCCUCUGUUUCUUUUU   2019

1.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2139   UAUAUACUCCCUCCGUUUCUUUUU   2162

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2201   UAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2240   UAUAUACUCCCUCCGUUUCUUUUU   2263

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2215   UAUAUACUCCCUCCGUUUCUUUUU   2238

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2160   UAUAUACUCCCUCCGUUUCUUUUU   2183

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2201   UAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2222   UAUAUACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2222   UAUAUACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2222   UAUAUACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2201   UAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2201   UAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2201   UAUAUACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1459   UAUAUACUCCCUCCGUUUCUUUUU   1482

0.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
JB163748.1
ncRNA:24   UUA-UAUGAGGGAGGCAAAGAAAAA   1
  |||-|||||||||||||||||||||
targets:6   AAUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   UUA-UAUGAGGGAGGCAAAGAAAAA   1
  |||-|||||||||||||||||||||
targets:6   AAUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
HI403287.1
ncRNA:24   UUA-UAUGAGGGAGGCAAAGAAAAA   1
  |||-|||||||||||||||||||||
targets:6   AAUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||=|||||||||||||||
targets:2492   CAUAUACUUCCUCCGUUUCUUUUU   2515

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||=|||||||||||||||
targets:1351   CAUAUACUUCCUCCGUUUCUUUUU   1374

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  |||--|||||||||||||||||||||
targets:135   AAUUAAUACUCCCUCCGUUUCUUUUU   160

0.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
LQ235499.1
ncRNA:24   UU--AUAUGAGGGAGGCAAAGAAAAA   1
  ||--||||||||||||||||||||||
targets:5   AACUUAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:24   UU--AUAUGAGGGAGGCAAAGAAAAA   1
  ||--||||||||||||||||||||||
targets:5   AACUUAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
JB163830.1
ncRNA:24   UU--AUAUGAGGGAGGCAAAGAAAAA   1
  ||--||||||||||||||||||||||
targets:5   AACUUAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
LQ240840.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
JB169171.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
HI408710.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
JB170657.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
HI410196.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
LQ242326.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=||||||||||||||||||||
targets:1   AUGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
XM_008658752.2
ncRNA:24   UUAUAUGA---GGGAGGCAAAGAAAAA   1
  ||||||||---||||||||||||||||
targets:2037   AAUAUACUACUCCCUCCGUUUCUUUUU   2063

3.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:24   UUAUAUGA---GGGAGGCAAAGAAAAA   1
  ||||||||---||||||||||||||||
targets:1970   AAUAUACUACUCCCUCCGUUUCUUUUU   1996

3.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||*|||||||||||||||||||||
targets:1539   AAGAUACUCCCUCCGUUUCUUUUU   1562

0.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
EZ061772.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |*||||||||||||||||||||||
targets:180   AUUAUACUCCCUCCGUUUCUUUUU   203

0.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
XM_008669400.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  =*||||||||||||||||||||||
targets:1596   GUUAUACUCCCUCCGUUUCUUUUU   1619

0.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
EU970288.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *||=||||||||=|||||||||||
targets:1327   CAUGUACUCCCUUCGUUUCUUUUU   1350

1.5 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
EU973473.1
ncRNA:24   UU--AUAUGAGGGAGGCAAAGAAAAA   1
  ||--|=||||||||||||||||||||
targets:643   AACUUGUACUCCCUCCGUUUCUUUUU   668

0.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
HI403267.1
ncRNA:24   UUAU--AUGAGGGAGGCAAAGAAAAA   1
  ||||--||=|||||||||||||||||
targets:94   AAUAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2074227 NA coding protein psRNATarget
JB163728.1
ncRNA:24   UUAU--AUGAGGGAGGCAAAGAAAAA   1
  ||||--||=|||||||||||||||||
targets:94   AAUAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2559767 NA coding protein psRNATarget
LQ235397.1
ncRNA:24   UUAU--AUGAGGGAGGCAAAGAAAAA   1
  ||||--||=|||||||||||||||||
targets:94   AAUAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2985353 NA coding protein psRNATarget
JB163740.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  |||--=||||||||||||||||||||
targets:5   AAUUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  |||--=||||||||||||||||||||
targets:5   AAUUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
JB163860.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--|||||||||||||||||||||
targets:5   GAUUCAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
LQ235529.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--|||||||||||||||||||||
targets:5   GAUUCAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
LQ235409.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  |||--=||||||||||||||||||||
targets:5   AAUUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
HI403399.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--|||||||||||||||||||||
targets:5   GAUUCAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
LQ242145.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=|||||||||=||||||||||
targets:1   AUGUACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
HI410015.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=|||||||||=||||||||||
targets:1   AUGUACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
JB170476.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ||=|||||||||=||||||||||
targets:1   AUGUACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  =|*|||||||||||||||||||||
targets:2431   GACAUACUCCCUCCGUUUCUUUUU   2454

0.0 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008677351.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||*=||||||||||||||||||||
targets:2053   AAGGUACUCCCUCCGUUUCUUUUU   2076

0.0 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
XM_008656936.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||*=||||||||||||||||||||
targets:160   AAAGUACUCCCUCCGUUUCUUUUU   183

0.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   UUAUA-UGAGGGAGGCAAAGAAAAA   1
  *||||-|||||||||||||||||||
targets:1267   CAUAUUACUCCCUCCGUUUCUUUUU   1291

2.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   UUAUA-UGAGGGAGGCAAAGAAAAA   1
  *||||-|||||||||||||||||||
targets:1161   CAUAUUACUCCCUCCGUUUCUUUUU   1185

2.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
EU952378.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  =|||||||||||||||||*|||||
targets:709   GAUAUACUCCCUCCGUUUAUUUUU   732

1.5 Zea mays clone 1278936 mitochondrial import inner membrane translocase subunit TIM14 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
LQ240748.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:1   AAU-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
JB169079.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:1   AAU-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
HI408618.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:1   AAU-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   UUAU----AUGAGGGAGGCAAAGAAAAA   1
  |||=----||||||||||||||||||||
targets:3690   AAUGCUAUUACUCCCUCCGUUUCUUUUU   3717

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   UUAU----AUGAGGGAGGCAAAGAAAAA   1
  |||=----||||||||||||||||||||
targets:2911   AAUGCUAUUACUCCCUCCGUUUCUUUUU   2938

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   UUAU----AUGAGGGAGGCAAAGAAAAA   1
  |||=----||||||||||||||||||||
targets:2805   AAUGCUAUUACUCCCUCCGUUUCUUUUU   2832

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   UUAU----AUGAGGGAGGCAAAGAAAAA   1
  |||=----||||||||||||||||||||
targets:2788   AAUGCUAUUACUCCCUCCGUUUCUUUUU   2815

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
LQ239400.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  **|=||||||||||||||||||||
targets:2   UUUGUACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
HI407270.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  **|=||||||||||||||||||||
targets:2   UUUGUACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
JB167731.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  **|=||||||||||||||||||||
targets:2   UUUGUACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--||||||||||=||||||||||
targets:1260   GAUGAAUACUCCCUCUGUUUCUUUUU   1285

1.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--||||||||||=||||||||||
targets:1396   GAUGAAUACUCCCUCUGUUUCUUUUU   1421

1.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--||||||||||=||||||||||
targets:1396   GAUGAAUACUCCCUCUGUUUCUUUUU   1421

1.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--||||||||||=||||||||||
targets:1215   GAUGAAUACUCCCUCUGUUUCUUUUU   1240

1.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
BT088158.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--||||||||||=||||||||||
targets:1196   GAUGAAUACUCCCUCUGUUUCUUUUU   1221

1.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||*||||
targets:908   UAUAUACUCCCUCCGUUUCGUUUU   931

1.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
EU968044.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||*||||
targets:1020   UAUAUACUCCCUCCGUUUCGUUUU   1043

1.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
EU973028.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--||||||||||=||||||||||
targets:1162   GAUGAAUACUCCCUCUGUUUCUUUUU   1187

1.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--||||||||||=||||||||||
targets:1056   GAUGAAUACUCCCUCUGUUUCUUUUU   1081

1.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
BT065083.2
ncRNA:24   UUAUAUGAGG---GAGGCAAAGAAAAA   1
  *|||||||||---||||||||||||||
targets:199   UAUAUACUCCUCCCUCCGUUUCUUUUU   225

3.0 Zea mays full-length cDNA clone ZM_BFb0081B22 mRNA, complete cds NA coding protein psRNATarget
BT068381.1
ncRNA:24   UUA--UAUGAGGGAGGCAAAGAAAAA   1
  =||--||||||||||=||||||||||
targets:1103   GAUGAAUACUCCCUCUGUUUCUUUUU   1128

1.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
BT017382.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||*|||
targets:691   CAUAUACUCCCUCCGUUUCUCUUU   714

1.5 Zea mays clone EL01N0326E08.c mRNA sequence NA coding protein psRNATarget
BT070166.1
ncRNA:24   UUAU--AUGAGGGAGGCAAAGAAAAA   1
  |=||--||||||||||||||=|||||
targets:758   AGUACGUACUCCCUCCGUUUUUUUUU   783

1.5 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
NM_001328133.1
ncRNA:24   UUAU--AUGAGGGAGGCAAAGAAAAA   1
  |=||--||||||||||||||=|||||
targets:758   AGUACGUACUCCCUCCGUUUUUUUUU   783

1.5 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
EZ112557.1
ncRNA:24   UUA-----UAUGAGGGAGGCAAAGAAAAA   1
  |||-----=||||||||||||||||||||
targets:39   AAUUGGAGGUACUCCCUCCGUUUCUUUUU   67

0.0 TSA: Zea mays contig48218, mRNA sequence NA coding protein psRNATarget
HI407305.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||*||||
targets:2   UAUAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
JB167766.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||*||||
targets:2   UAUAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
LQ239435.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||*||||
targets:2   UAUAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
XM_008664460.2
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *|||-|||||||||=||||||||||
targets:108   UAUAGUACUCCCUCUGUUUCUUUUU   132

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *=*|||||||||||||||||||||
targets:1147   UGGAUACUCCCUCCGUUUCUUUUU   1170

0.0 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ***|||||||||||||||||||||
targets:1284   CUAAUACUCCCUCCGUUUCUUUUU   1307

0.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ***|||||||||||||||||||||
targets:1284   CUAAUACUCCCUCCGUUUCUUUUU   1307

0.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
EU964879.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||*=||||||||||||||=|||||
targets:843   AAAGUACUCCCUCCGUUUUUUUUU   866

1.5 Zea mays clone 282287 ribulose-phosphate 3-epimerase mRNA, complete cds NA coding protein psRNATarget
NM_001156378.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||*=||||||||||||||=|||||
targets:842   AAAGUACUCCCUCCGUUUUUUUUU   865

1.5 Zea mays ribulose-phosphate 3-epimerase (LOC100283478), mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ***|||||||||||||||||||||
targets:226   CCAAUACUCCCUCCGUUUCUUUUU   249

0.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
BT065536.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||*=||||||||||||||=|||||
targets:784   AAAGUACUCCCUCCGUUUUUUUUU   807

1.5 Zea mays full-length cDNA clone ZM_BFb0224G04 mRNA, complete cds NA coding protein psRNATarget
EU974849.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:566   AA-GUACUCCCUCCGUUUCUUUUU   588

0.0 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:566   AA-GUACUCCCUCCGUUUCUUUUU   588

0.0 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
XM_008664463.2
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *|||-|||||||||=||||||||||
targets:88   UAUAGUACUCCCUCUGUUUCUUUUU   112

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
EU964901.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:494   AA-GUACUCCCUCCGUUUCUUUUU   516

0.0 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
HI403401.1
ncRNA:24   UUAUA-UGAGGGAGGCAAAGAAAAA   1
  *=|||-|||||||||||||||||||
targets:6   UGUAUUACUCCCUCCGUUUCUUUUU   30

2.0 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
JB163862.1
ncRNA:24   UUAUA-UGAGGGAGGCAAAGAAAAA   1
  *=|||-|||||||||||||||||||
targets:6   UGUAUUACUCCCUCCGUUUCUUUUU   30

2.0 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
LQ235531.1
ncRNA:24   UUAUA-UGAGGGAGGCAAAGAAAAA   1
  *=|||-|||||||||||||||||||
targets:6   UGUAUUACUCCCUCCGUUUCUUUUU   30

2.0 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
JB166321.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |||-|||||=||||||||||||||
targets:2   AAU-UACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
LQ237990.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |||-|||||=||||||||||||||
targets:2   AAU-UACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
HI405860.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |||-|||||=||||||||||||||
targets:2   AAU-UACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
HI409328.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  **|||||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  **|||||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:1   AA-GUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
LQ241458.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  **|||||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
JB169406.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:1   AA-GUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI408945.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:1   AA-GUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:1   AA-GUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
LQ242091.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:1   AA-GUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
LQ241075.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ||-=||||||||||||||||||||
targets:1   AA-GUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
XM_020537567.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *||-||||||||||||||||||||
targets:1449   UAU-UACUCCCUCCGUUUCUUUUU   1471

0.0 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:2137   GCUACUACUCCCUCCGUUUCUUUUU   2161

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:2106   GCUACUACUCCCUCCGUUUCUUUUU   2130

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:2024   GCUACUACUCCCUCCGUUUCUUUUU   2048

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:1993   GCUACUACUCCCUCCGUUUCUUUUU   2017

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  *|*=||||||||||||||||||||
targets:186   CACGUACUCCCUCCGUUUCUUUUU   209

0.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  **||-||||||||||||||||||||
targets:1522   CCUACUACUCCCUCCGUUUCUUUUU   1546

0.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:1404   GCUACUACUCCCUCCGUUUCUUUUU   1428

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:1298   GCUACUACUCCCUCCGUUUCUUUUU   1322

0.0 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:1296   GCUACUACUCCCUCCGUUUCUUUUU   1320

0.0 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:1244   GCUACUACUCCCUCCGUUUCUUUUU   1268

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:1230   GCUACUACUCCCUCCGUUUCUUUUU   1254

0.0 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:1215   GCUACUACUCCCUCCGUUUCUUUUU   1239

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
BT062074.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:1132   GCUACUACUCCCUCCGUUUCUUUUU   1156

0.0 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
HI408570.1
ncRNA:22   AU-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
LQ240700.1
ncRNA:22   AU-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
JB169031.1
ncRNA:22   AU-AUGAGGGAGGCAAAGAAAAA   1
  ||-||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
NM_001175582.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ==|=|||||||||||||||*||||
targets:1428   GGUGUACUCCCUCCGUUUCGUUUU   1451

1.5 Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA NA coding protein psRNATarget
BT065656.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ==|=|||||||||||||||*||||
targets:1428   GGUGUACUCCCUCCGUUUCGUUUU   1451

1.5 Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds NA coding protein psRNATarget
XM_020549872.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ==|=|||||||||||||||*||||
targets:1261   GGUGUACUCCCUCCGUUUCGUUUU   1284

1.5 PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA NA coding protein psRNATarget
BT054612.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *=||-||||||=|||||||||||||
targets:1359   UGUAGUACUCCUUCCGUUUCUUUUU   1383

1.0 Zea mays full-length cDNA clone ZM_BFc0190P19 mRNA, complete cds NA coding protein psRNATarget
LQ235486.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ***=||||||||||||||||||||
targets:7   UUCGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
JB163817.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ***=||||||||||||||||||||
targets:7   UUCGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
HI403356.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ***=||||||||||||||||||||
targets:7   UUCGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
HI409599.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  **||||||=||||||||||||||
targets:1   UCAUACUCUCUCCGUUUCUUUUU   23

1.0 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
LQ241729.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  **||||||=||||||||||||||
targets:1   UCAUACUCUCUCCGUUUCUUUUU   23

1.0 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
JB170060.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  **||||||=||||||||||||||
targets:1   UCAUACUCUCUCCGUUUCUUUUU   23

1.0 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
HI407211.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ==|=|||||||||||||||*||||
targets:2   GGUGUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5336 from Patent EP2074227 NA coding protein psRNATarget
LQ239341.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ==|=|||||||||||||||*||||
targets:2   GGUGUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5336 from Patent EP2985353 NA coding protein psRNATarget
JB167672.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ==|=|||||||||||||||*||||
targets:2   GGUGUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5336 from Patent EP2559767 NA coding protein psRNATarget
XM_020547478.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  **||||||||*|||||||||||||
targets:3177   CUUAUACUCCAUCCGUUUCUUUUU   3200

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020547479.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  **||||||||*|||||||||||||
targets:3177   CUUAUACUCCAUCCGUUUCUUUUU   3200

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008669138.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  **||||||||*|||||||||||||
targets:2799   CUUAUACUCCAUCCGUUUCUUUUU   2822

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008669142.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  **||||||||*|||||||||||||
targets:2667   CUUAUACUCCAUCCGUUUCUUUUU   2690

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008669143.2
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  **||||||||*|||||||||||||
targets:2737   CUUAUACUCCAUCCGUUUCUUUUU   2760

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X7, mRNA NA coding protein psRNATarget
HI403294.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  |=*|-||||||||||||||||||||
targets:6   AGAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  |=*|-||||||||||||||||||||
targets:6   AGAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
JB163755.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  |=*|-||||||||||||||||||||
targets:6   AGAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
BT067066.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  |=|-|||||||||||||||||||*
targets:416   AGU-UACUCCCUCCGUUUCUUUUA   438

1.0 Zea mays full-length cDNA clone ZM_BFb0180L06 mRNA, complete cds NA coding protein psRNATarget
EU953599.1
ncRNA:24   UUAUAUGAGGGAGGCAAAGAAAAA   1
  ****||||||||||||||||||||
targets:1221   CCACUACUCCCUCCGUUUCUUUUU   1244

0.0 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008669416.2
ncRNA:24   UUAU--AUGAGGGAGGCAAAGAAAAA   1
  |=||--|||||*||||||||||||||
targets:483   AGUAGCUACUCACUCCGUUUCUUUUU   508

1.0 PREDICTED: Zea mays hypothetical protein (LOC100275307), transcript variant X1, mRNA NA coding protein psRNATarget
JB170160.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ***||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
HI409616.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  |**||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  |**||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
JB170077.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  |**||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
LQ241829.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ***||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
HI409699.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  ***||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ241745.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  |**||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
HI409615.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  |**||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
JB170076.1
ncRNA:23   UAUAUGAGGGAGGCAAAGAAAAA   1
  |**||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
XM_020544902.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *|||-||||||*|||||||||||||
targets:3145   UAUAGUACUCCAUCCGUUUCUUUUU   3169

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *|||-||||||*|||||||||||||
targets:3136   UAUAGUACUCCAUCCGUUUCUUUUU   3160

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001352327.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *=||-||||||=||=||||||||||
targets:2664   UGUAGUACUCCUUCUGUUUCUUUUU   2688

2.5 Zea mays delta-1-pyrroline-5-carboxylate synthase-like (LOC103630430), mRNA NA coding protein psRNATarget
XM_020545991.1
ncRNA:24   UUA---UAUGAGGGAGGCAAAGAAAAA   1
  |||---|||=||||||||||||*||||
targets:2494   AAUGAAAUAUUCCCUCCGUUUCGUUUU   2520

2.5 PREDICTED: Zea mays transcription factor APG (LOC103641361), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008664716.2
ncRNA:24   UUA---UAUGAGGGAGGCAAAGAAAAA   1
  |||---|||=||||||||||||*||||
targets:2386   AAUGAAAUAUUCCCUCCGUUUCGUUUU   2412

2.5 PREDICTED: Zea mays transcription factor APG (LOC103641361), transcript variant X2, mRNA NA coding protein psRNATarget
BT037092.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *|||-||||||*|||||||||||||
targets:1079   UAUAGUACUCCAUCCGUUUCUUUUU   1103

1.0 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
NM_001143050.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *|||-||||||*|||||||||||||
targets:1079   UAUAGUACUCCAUCCGUUUCUUUUU   1103

1.0 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
EZ058532.1
ncRNA:24   UUAU-AUGAGGGAGGCAAAGAAAAA   1
  *=|=-|||||||||=||||||||||
targets:265   CGUGCUACUCCCUCUGUUUCUUUUU   289

1.5 TSA: Zea mays contig59654, mRNA sequence NA coding protein psRNATarget
HI408623.1
ncRNA:24   UUA--UAUGAGGGAGG-CAAAGAAAAA   1
  |=|--=||||||||||-||||||||||
targets:2   AGUUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2074227 NA coding protein psRNATarget
JB169084.1
ncRNA:24   UUA--UAUGAGGGAGG-CAAAGAAAAA   1
  |=|--=||||||||||-||||||||||
targets:2   AGUUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2559767 NA coding protein psRNATarget
LQ240753.1
ncRNA:24   UUA--UAUGAGGGAGG-CAAAGAAAAA   1
  |=|--=||||||||||-||||||||||
targets:2   AGUUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2985353 NA coding protein psRNATarget
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