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BaseInfo

ncRNA ID	novel_zma_miR48
Species	Zea mays
Class	miRNA
Genome position	Chr2:3995206-3995259 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2089698;SRR2089699;SRR2089704;SRR2089706;SRR2089707
Length	24
Mature sequence(if miRNA)	31 - CCAUCGGGUUUUGGGUUUCGGGUA - 54
Stem-loop(if miRNA)	--   -       -U    UA     GU   CCC AAACCCG  ACCC  AUGGG  A   ||| |||||||  ||||  |||||  A   GGG UUUGGGU  UGGG  UACCC  A AU   C       UU    -C     AA
Stem-loop sequence	CCCAAACCCGUACCCUAAUGGGGUAAAAACCCAUCGGGUUUUGGGUUUCGGGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU942434.1	ncRNA:24   AUGGGCUUUGGGUUUUGGGCUACC   1   |||||||||||||||||||||||| targets:837   UACCCGAAACCCAAAACCCGAUGG   860 Target Full Sequence	0.0	Zea mays clone 1498794 mRNA sequence	NA	coding protein	psRNATarget
HI405819.1	ncRNA:24   AUGGGCUUUGGGUUUUGGGCUACC   1   ||||||||||||=||||||||||| targets:9   UACCCGAAACCCGAAACCCGAUGG   32 Target Full Sequence	1.5	Sequence 3944 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237949.1	ncRNA:24   AUGGGCUUUGGGUUUUGGGCUACC   1   ||||||||||||=||||||||||| targets:9   UACCCGAAACCCGAAACCCGAUGG   32 Target Full Sequence	1.5	Sequence 3944 from Patent EP2985353	NA	coding protein	psRNATarget
JB166280.1	ncRNA:24   AUGGGCUUUGGGUUUUGGGCUACC   1   ||||||||||||=||||||||||| targets:9   UACCCGAAACCCGAAACCCGAUGG   32 Target Full Sequence	1.5	Sequence 3944 from Patent EP2559767	NA	coding protein	psRNATarget
BT084992.1	ncRNA:24   AUGGGCUUUGGGUUUUGGGCUACC   1   ||||||||||||=||||||||||| targets:877   UACCCGAAACCCGAAACCCGAUGG   900 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0222N10 mRNA, complete cds	NA	coding protein	psRNATarget
EU945315.1	ncRNA:24   AUGGGCUUUGGGUUUUGGGCUACC   1   ||||||||||||=||||||||||| targets:789   UACCCGAAACCCGAAACCCGAUGG   812 Target Full Sequence	1.5	Zea mays clone 257965 mRNA sequence	NA	coding protein	psRNATarget
NM_001112293.3	ncRNA:24   AUGGGCUUUGGGUUUUGGGCUACC   1   ||||||||||||=||||||||||| targets:2225   UACCCGAAACCCGAAACCCGAUGG   2248 Target Full Sequence	1.5	Zea mays protein disulfide isomerase 5 (pdi5), mRNA	NA	coding protein	psRNATarget