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BaseInfo

ncRNA ID novel_zma_miR47
Species Zea mays
Class miRNA
Genome position Chr10:83880220-83880268 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089704;SRR2089706
Length 24
Mature sequence(if miRNA) 26 - GACGGGUAAACGGGGAUGGGGAAG - 49
Stem-loop(if miRNA) -- A    UA        U     A
  G CGGG  AACGGGGA GGGGA G
  | ||||  |||||||| ||||| C
  C GCCC  UUGCCCCU CCCCU A
GG -    -C        U     U
Stem-loop sequence GACGGGUAAACGGGGAUGGGGAAGCAUUCCCCUUCCCCGUUCCCCGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542351.1
ncRNA:24   GAAGGGGUAGGGGCAAAUGGGCAG   1
  |*||||||||||||||||||||||
targets:310   CAUCCCCAUCCCCGUUUACCCGUC   333

0.0 PREDICTED: Zea mays uncharacterized LOC103634680 (LOC103634680), transcript variant X5, mRNA NA coding protein psRNATarget