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BaseInfo

ncRNA ID	novel_zma_miR43
Species	Zea mays
Class	miRNA
Genome position	Chr2:30385259-30385324 [-]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089707;SRR2089708
Length	24
Mature sequence(if miRNA)	43 - GUUUCUUUUUAAUUGUCGCUGGAU - 66
Stem-loop(if miRNA)	--     U     A               U  A   GUUUC UUUUA UUGUCGCUGGAUAGU CA U   ||||| ||||| ||||||||||||||| ||   CAAAG AAAAU AACAGCGACCUAUCA GU U GG     C     C               C  U
Stem-loop sequence	GUUUCUUUUUAAUUGUCGCUGGAUAGUUCAAUUUUGCACUAUCCAGCGACAACUAAAACGAAACGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU953133.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||=||||||||||||| targets:1196   AUCCAGCGACGAUUAAAAAGAAAC   1219 Target Full Sequence	1.0	Zea mays clone 1385620 protein binding protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153573.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||=||||||||||||| targets:1196   AUCCAGCGACGAUUAAAAAGAAAC   1219 Target Full Sequence	1.0	Zea mays protein binding protein (LOC100280655), mRNA	NA	coding protein	psRNATarget
LQ235202.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:43   AUCCAGCGACAACUAAAAAGAAAC   66 Target Full Sequence	1.5	Sequence 1197 from Patent EP2985353	NA	coding protein	psRNATarget
HI403072.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:43   AUCCAGCGACAACUAAAAAGAAAC   66 Target Full Sequence	1.5	Sequence 1197 from Patent EP2074227	NA	coding protein	psRNATarget
JB163533.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:43   AUCCAGCGACAACUAAAAAGAAAC   66 Target Full Sequence	1.5	Sequence 1197 from Patent EP2559767	NA	coding protein	psRNATarget
HI409551.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:46   AUCCAGCGACAACUAAAAAGAAAC   69 Target Full Sequence	1.5	Sequence 7676 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241681.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:46   AUCCAGCGACAACUAAAAAGAAAC   69 Target Full Sequence	1.5	Sequence 7676 from Patent EP2985353	NA	coding protein	psRNATarget
JB170012.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:46   AUCCAGCGACAACUAAAAAGAAAC   69 Target Full Sequence	1.5	Sequence 7676 from Patent EP2559767	NA	coding protein	psRNATarget
HI409094.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:51   AUCCAGCGACAAUUAAAACGAAAC   74 Target Full Sequence	1.5	Sequence 7219 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241224.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:51   AUCCAGCGACAAUUAAAACGAAAC   74 Target Full Sequence	1.5	Sequence 7219 from Patent EP2985353	NA	coding protein	psRNATarget
JB169555.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:51   AUCCAGCGACAAUUAAAACGAAAC   74 Target Full Sequence	1.5	Sequence 7219 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241364.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:53   AUCCAGCGACAACUAAAAAGAAAC   76 Target Full Sequence	1.5	Sequence 7359 from Patent EP2985353	NA	coding protein	psRNATarget
JB169695.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:53   AUCCAGCGACAACUAAAAAGAAAC   76 Target Full Sequence	1.5	Sequence 7359 from Patent EP2559767	NA	coding protein	psRNATarget
HI409234.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:53   AUCCAGCGACAACUAAAAAGAAAC   76 Target Full Sequence	1.5	Sequence 7359 from Patent EP2074227	NA	coding protein	psRNATarget
HI410015.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 8140 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAGUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
JB169079.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
JB170160.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAGUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242145.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 8140 from Patent EP2985353	NA	coding protein	psRNATarget
HI409699.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAGUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
HI408618.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
JB170476.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:54   AUCCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 8140 from Patent EP2559767	NA	coding protein	psRNATarget
HI407324.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:56   AUCCAGCGACAACUAAAAAGAAAC   79 Target Full Sequence	1.5	Sequence 5449 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239454.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:56   AUCCAGCGACAACUAAAAAGAAAC   79 Target Full Sequence	1.5	Sequence 5449 from Patent EP2985353	NA	coding protein	psRNATarget
JB167785.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:56   AUCCAGCGACAACUAAAAAGAAAC   79 Target Full Sequence	1.5	Sequence 5449 from Patent EP2559767	NA	coding protein	psRNATarget
JB163862.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:61   AUCCAGCGACAAAUAAAAAGAAAC   84 Target Full Sequence	1.5	Sequence 1526 from Patent EP2559767	NA	coding protein	psRNATarget
HI403401.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:61   AUCCAGCGACAAAUAAAAAGAAAC   84 Target Full Sequence	1.5	Sequence 1526 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235531.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:61   AUCCAGCGACAAAUAAAAAGAAAC   84 Target Full Sequence	1.5	Sequence 1526 from Patent EP2985353	NA	coding protein	psRNATarget
EZ061437.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:218   AUCCAGCGACAAAUAAAAAGAAAC   241 Target Full Sequence	1.5	TSA: Zea mays contig62559, mRNA sequence	NA	coding protein	psRNATarget
EZ089411.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:357   AUCCAGCGACAACUAAAAAGAAAC   380 Target Full Sequence	1.5	TSA: Zea mays contig25057, mRNA sequence	NA	coding protein	psRNATarget
BT062468.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:621   AUCCAGCGACAACUAAAAAGAAAC   644 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT060817.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:280   AUCCAGCGACAAAUAAAAAGAAAC   303 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
BT068381.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:1159   AUCCAGCGACAAUUAAAACGAAAC   1182 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds	NA	coding protein	psRNATarget
EU956063.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:1112   AUCCAGCGACAAUUAAAACGAAAC   1135 Target Full Sequence	1.5	Zea mays clone 1556707 mRNA sequence	NA	coding protein	psRNATarget
EU973028.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:1218   AUCCAGCGACAAUUAAAACGAAAC   1241 Target Full Sequence	1.5	Zea mays clone 391970 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT088158.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:1252   AUCCAGCGACAAUUAAAACGAAAC   1275 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1216   AUCCAGCGACAAAUAAAAAGAAAC   1239 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1338   AUCCAGCGACAAAUAAAAAGAAAC   1361 Target Full Sequence	1.5	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1338   AUCCAGCGACAAAUAAAAAGAAAC   1361 Target Full Sequence	1.5	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:191   AUCCAGCGACAAAUAAAAAGAAAC   214 Target Full Sequence	1.5	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
EU971616.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1212   AUCCAGCGACAACUAAAAAGAAAC   1235 Target Full Sequence	1.5	Zea mays clone 368130 rieske domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656167.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:1271   AUCCAGCGACAAUUAAAACGAAAC   1294 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008651544.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1405   AUCCAGCGACAAAUAAAAAGAAAC   1428 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT035950.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:1452   AUCCAGCGACAAUUAAAACGAAAC   1475 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138729.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:1452   AUCCAGCGACAAUUAAAACGAAAC   1475 Target Full Sequence	1.5	Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1322   AUCCAGCGACAAAUAAAAAGAAAC   1345 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008656166.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||||||||*||||| targets:1316   AUCCAGCGACAAUUAAAACGAAAC   1339 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001156357.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1565   AUCCAGCGACAACUAAAAAGAAAC   1588 Target Full Sequence	1.5	Zea mays Acetylornithine deacetylase (pco121857a), mRNA	NA	coding protein	psRNATarget
EU964807.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1565   AUCCAGCGACAACUAAAAAGAAAC   1588 Target Full Sequence	1.5	Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674191.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1201   AUCCAGCGACAACUAAAAAGAAAC   1224 Target Full Sequence	1.5	PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1577   AUCCAGCGACAAAUAAAAAGAAAC   1600 Target Full Sequence	1.5	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:1593   AUCCAGCGACAAAUAAAAAGAAAC   1616 Target Full Sequence	1.5	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
EU957018.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:2050   AUCCAGCGACAAAUAAAAAGAAAC   2073 Target Full Sequence	1.5	Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008651543.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:2546   AUCCAGCGACAAAUAAAAAGAAAC   2569 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020551485.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:2578   AUCCAGCGACAACUAAAAAGAAAC   2601 Target Full Sequence	1.5	PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:2846   AUCCAGCGACAAAUAAAAAGAAAC   2869 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:2863   AUCCAGCGACAAAUAAAAAGAAAC   2886 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:2969   AUCCAGCGACAAAUAAAAAGAAAC   2992 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||| targets:3748   AUCCAGCGACAAAUAAAAAGAAAC   3771 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
JB170422.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
JB169406.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
HI409961.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
HI408945.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:54   AUUCAGCGACAAAUAAAAAGAAAC   77 Target Full Sequence	1.5	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
JB167691.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:56   AUUCAGCGACAACUAAAAAGAAAC   79 Target Full Sequence	1.5	Sequence 5355 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239360.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:56   AUUCAGCGACAACUAAAAAGAAAC   79 Target Full Sequence	1.5	Sequence 5355 from Patent EP2985353	NA	coding protein	psRNATarget
HI407230.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:56   AUUCAGCGACAACUAAAAAGAAAC   79 Target Full Sequence	1.5	Sequence 5355 from Patent EP2074227	NA	coding protein	psRNATarget
JB163740.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||= targets:61   AUCCAGCGACAAAUAAAAAGAAAU   84 Target Full Sequence	2.5	Sequence 1404 from Patent EP2559767	NA	coding protein	psRNATarget
HI403279.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||= targets:61   AUCCAGCGACAAAUAAAAAGAAAU   84 Target Full Sequence	2.5	Sequence 1404 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235409.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||||*||||||||||= targets:61   AUCCAGCGACAAAUAAAAAGAAAU   84 Target Full Sequence	2.5	Sequence 1404 from Patent EP2985353	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:547   AUUCAGCGACAAAUAAAAAGAAAC   570 Target Full Sequence	1.5	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:619   AUUCAGCGACAAAUAAAAAGAAAC   642 Target Full Sequence	1.5	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:619   AUUCAGCGACAAAUAAAAAGAAAC   642 Target Full Sequence	1.5	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656230.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=|||||||||*||||||||||| targets:37   AUUCAGCGACAACUAAAAAGAAAC   60 Target Full Sequence	1.5	PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA	NA	coding protein	psRNATarget
JB170144.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=||||||=||*||||||||||| targets:46   AUUCAGCGAUAACUAAAAAGAAAC   69 Target Full Sequence	2.5	Sequence 7808 from Patent EP2559767	NA	coding protein	psRNATarget
HI409683.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=||||||=||*||||||||||| targets:46   AUUCAGCGAUAACUAAAAAGAAAC   69 Target Full Sequence	2.5	Sequence 7808 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241813.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||=||||||=||*||||||||||| targets:46   AUUCAGCGAUAACUAAAAAGAAAC   69 Target Full Sequence	2.5	Sequence 7808 from Patent EP2985353	NA	coding protein	psRNATarget
JB170077.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||||*||||||||||* targets:54   AUCUAGCGACAAAUAAAAAGAAAG   77 Target Full Sequence	2.5	Sequence 7741 from Patent EP2559767	NA	coding protein	psRNATarget
HI409616.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||||*||||||||||* targets:54   AUCUAGCGACAAAUAAAAAGAAAG   77 Target Full Sequence	2.5	Sequence 7741 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241746.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||||*||||||||||* targets:54   AUCUAGCGACAAAUAAAAAGAAAG   77 Target Full Sequence	2.5	Sequence 7741 from Patent EP2985353	NA	coding protein	psRNATarget
HI403313.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1438 from Patent EP2074227	NA	coding protein	psRNATarget
JB163835.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1499 from Patent EP2559767	NA	coding protein	psRNATarget
HI403367.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1492 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235497.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1492 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235443.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1438 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235504.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1499 from Patent EP2985353	NA	coding protein	psRNATarget
JB163774.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1438 from Patent EP2559767	NA	coding protein	psRNATarget
JB163828.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1492 from Patent EP2559767	NA	coding protein	psRNATarget
HI403374.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:45   AUCCAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1499 from Patent EP2074227	NA	coding protein	psRNATarget
HI406120.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||*|||*||||||||||| targets:46   AUCCAGCGCCAACUAAAAAGAAAC   69 Target Full Sequence	2.5	Sequence 4245 from Patent EP2074227	NA	coding protein	psRNATarget
JB166581.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||*|||*||||||||||| targets:46   AUCCAGCGCCAACUAAAAAGAAAC   69 Target Full Sequence	2.5	Sequence 4245 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238250.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||*|||*||||||||||| targets:46   AUCCAGCGCCAACUAAAAAGAAAC   69 Target Full Sequence	2.5	Sequence 4245 from Patent EP2985353	NA	coding protein	psRNATarget
JB166818.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||*||||||*||||||||||| targets:48   AUCCAACGACAACUAAAAAGAAAC   71 Target Full Sequence	2.5	Sequence 4482 from Patent EP2559767	NA	coding protein	psRNATarget
HI406357.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||*||||||*||||||||||| targets:48   AUCCAACGACAACUAAAAAGAAAC   71 Target Full Sequence	2.5	Sequence 4482 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238487.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||*||||||*||||||||||| targets:48   AUCCAACGACAACUAAAAAGAAAC   71 Target Full Sequence	2.5	Sequence 4482 from Patent EP2985353	NA	coding protein	psRNATarget
HI405842.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:47   AUCCAGCGACUAAUAAAAAGAAAC   70 Target Full Sequence	2.5	Sequence 3967 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237972.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:47   AUCCAGCGACUAAUAAAAAGAAAC   70 Target Full Sequence	2.5	Sequence 3967 from Patent EP2985353	NA	coding protein	psRNATarget
JB166303.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:47   AUCCAGCGACUAAUAAAAAGAAAC   70 Target Full Sequence	2.5	Sequence 3967 from Patent EP2559767	NA	coding protein	psRNATarget
HI405824.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:50   AUCCAGCGACUAAUAAAAAGAAAC   73 Target Full Sequence	2.5	Sequence 3949 from Patent EP2074227	NA	coding protein	psRNATarget
JB166285.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:50   AUCCAGCGACUAAUAAAAAGAAAC   73 Target Full Sequence	2.5	Sequence 3949 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237954.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:50   AUCCAGCGACUAAUAAAAAGAAAC   73 Target Full Sequence	2.5	Sequence 3949 from Patent EP2985353	NA	coding protein	psRNATarget
HI403369.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||*||||||*||||||||||| targets:61   AUCCAACGACAAAUAAAAAGAAAC   84 Target Full Sequence	2.5	Sequence 1494 from Patent EP2074227	NA	coding protein	psRNATarget
JB163830.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||*||||||*||||||||||| targets:61   AUCCAACGACAAAUAAAAAGAAAC   84 Target Full Sequence	2.5	Sequence 1494 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235499.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||*||||||*||||||||||| targets:61   AUCCAACGACAAAUAAAAAGAAAC   84 Target Full Sequence	2.5	Sequence 1494 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008664463.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:143   AUCCAGCGACUAAUAAAAAGAAAC   166 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA	NA	coding protein	psRNATarget
NM_001328133.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:814   AUCCAGCGACUAAUAAAAAGAAAC   837 Target Full Sequence	2.5	Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA	NA	coding protein	psRNATarget
BT070166.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:814   AUCCAGCGACUAAUAAAAAGAAAC   837 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153043.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||*||||||||*||||||||||| targets:885   AUCGAGCGACAACUAAAAAGAAAC   908 Target Full Sequence	1.5	Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA	NA	coding protein	psRNATarget
BT055583.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||*||||||||*||||||||||| targets:885   AUCGAGCGACAACUAAAAAGAAAC   908 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008675381.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:1265   AUCCAGCGACUAAUAAAAAGAAAC   1288 Target Full Sequence	2.5	PREDICTED: Zea mays probable WRKY transcription factor 48 (LOC103649650), mRNA	NA	coding protein	psRNATarget
EU970288.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:1373   AUCCAGCGACUAAUAAAAAGAAAC   1396 Target Full Sequence	2.5	Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008669400.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:1650   AUCCAGCGACUAAUAAAAAGAAAC   1673 Target Full Sequence	2.5	PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT088136.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||*|||||||||*||||||||||| targets:804   AUACAGCGACAAAUAAAAAGAAAC   827 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196908.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||*|||||||||*||||||||||| targets:804   AUACAGCGACAAAUAAAAAGAAAC   827 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA	NA	coding protein	psRNATarget
XM_008656936.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:214   AUCCAGCGACUAAUAAAAAGAAAC   237 Target Full Sequence	2.5	PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008675770.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:1858   AUCCAGCGACUAAUAAAAAGAAAC   1881 Target Full Sequence	2.5	PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA	NA	coding protein	psRNATarget
XM_020542418.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:2025   AUCCAGCGACUAAUAAAAAGAAAC   2048 Target Full Sequence	2.5	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008658752.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:2092   AUCCAGCGACUAAUAAAAAGAAAC   2115 Target Full Sequence	2.5	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001158152.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||||*||||*||||||||||| targets:2163   AUCCAGCUACAACUAAAAAGAAAC   2186 Target Full Sequence	2.5	Zea mays cyclin-like F-box (LOC100285258), mRNA	NA	coding protein	psRNATarget
EU971439.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||||*||||*||||||||||| targets:2163   AUCCAGCUACAACUAAAAAGAAAC   2186 Target Full Sequence	2.5	Zea mays clone 364738 cyclin-like F-box mRNA, complete cds	NA	coding protein	psRNATarget
XM_020544250.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||||*||||||*||||||||||| targets:2485   AUCCAACGACAAAUAAAAAGAAAC   2508 Target Full Sequence	2.5	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546173.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||*|||||||*||||||||||| targets:1513   AUCCUGCGACAAAUAAAAAGAAAC   1536 Target Full Sequence	1.5	PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA	NA	coding protein	psRNATarget
XM_008664460.2	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   ||||||||||*|*||||||||||| targets:163   AUCCAGCGACUAAUAAAAAGAAAC   186 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI403385.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||*|*||||||||||| targets:45   AUCUAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1510 from Patent EP2074227	NA	coding protein	psRNATarget
JB163846.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||*|*||||||||||| targets:45   AUCUAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1510 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235515.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||*|*||||||||||| targets:45   AUCUAGCGACUAAUAAAAAGAAAC   68 Target Full Sequence	2.5	Sequence 1510 from Patent EP2985353	NA	coding protein	psRNATarget
LQ237960.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||*|*||||||||||| targets:50   AUCUAGCGACUAAUAAAAAGAAAC   73 Target Full Sequence	2.5	Sequence 3955 from Patent EP2985353	NA	coding protein	psRNATarget
JB166291.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||*|*||||||||||| targets:50   AUCUAGCGACUAAUAAAAAGAAAC   73 Target Full Sequence	2.5	Sequence 3955 from Patent EP2559767	NA	coding protein	psRNATarget
HI405830.1	ncRNA:24   UAGGUCGCUGUUAAUUUUUCUUUG   1   |||=||||||*|*||||||||||| targets:50   AUCUAGCGACUAAUAAAAAGAAAC   73 Target Full Sequence	2.5	Sequence 3955 from Patent EP2074227	NA	coding protein	psRNATarget