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BaseInfo

ncRNA ID novel_zma_miR39
Species Zea mays
Class miRNA
Genome position Chr2:44688616-44688665 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR1997865;SRR1997866;SRR2089700;SRR2089701;SRR2089704;SRR2089705;SRR2089708
Length 22
Mature sequence(if miRNA) 29 - CGAUAUGUGGGGCCGACGGUGA - 50
Stem-loop(if miRNA) --   U    G     GA     AU
  CGA AUGU GGGCC  CGGUG  G
  ||| |||| |||||  |||||  A
  GUU UACG CCCGG  GUUAC  C
GA   C    G     -G     CC
Stem-loop sequence CGAUAUGUGGGGCCGACGGUGAUGACCCCAUUGGGGCCCGGCAUCUUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU946750.1
ncRNA:22   AGUGGCAGCCGGGGUGUAUAGC   1
  *|*||||*||||||||||=|||
targets:432   GCCCCGUGGGCCCCACAUGUCG   453

2.5 Zea mays clone 323292 mRNA sequence NA coding protein psRNATarget