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BaseInfo

ncRNA ID	novel_zma_miR37
Species	Zea mays
Class	miRNA
Genome position	Chr2:50786204-50786262 [-]
Reference genome	RefGen_v4
Source	SRR2089709
Length	24
Mature sequence(if miRNA)	36 - CCGGACUGUCUGGCGUGCCACCGG - 59
Stem-loop(if miRNA)	ACUGUCUGGCGUGCCACCGGACAG CCGG                        U ||||                        G GUGG                        U     CCUGUGACAGGCCACCACGUGGCU
Stem-loop sequence	CCGGACUGUCUGGCGUGCCACCGGACAGUGUUCGGUGCACCACCGGACAGUGUCCGGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ106959.1	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   ||||||||||*||=|||||||||| targets:93   CCGGUGGCACACCGGACAGUCCGG   116 Target Full Sequence	2.5	TSA: Zea mays contig42617, mRNA sequence	NA	coding protein	psRNATarget
BT083610.2	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   ||||||||||*||=|||||||||| targets:796   CCGGUGGCACACCGGACAGUCCGG   819 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT083610.2	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   |||*||||||*||=|||||||||| targets:694   CCGCUGGCACACCGGACAGUCCGG   717 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
BT065201.2	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   |||*||||||*||=|||||||||| targets:721   CCGUUGGCACACCGGACAGUCCGG   744 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
EU940845.1	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   ||*|||||||*||=|||||||||| targets:1378   CCCGUGGCACACCGGACAGUCCGG   1401 Target Full Sequence	2.5	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
HI410005.1	ncRNA:24   GGC-CACCGUGCGGUCUGUCAGGCC   1   =||-|||||=|*||||||||||||| targets:1   UCGAGUGGCGCACCAGACAGUCCGG   25 Target Full Sequence	2.0	Sequence 8130 from Patent EP2074227	NA	coding protein	psRNATarget
JB170466.1	ncRNA:24   GGC-CACCGUGCGGUCUGUCAGGCC   1   =||-|||||=|*||||||||||||| targets:1   UCGAGUGGCGCACCAGACAGUCCGG   25 Target Full Sequence	2.0	Sequence 8130 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242135.1	ncRNA:24   GGC-CACCGUGCGGUCUGUCAGGCC   1   =||-|||||=|*||||||||||||| targets:1   UCGAGUGGCGCACCAGACAGUCCGG   25 Target Full Sequence	2.0	Sequence 8130 from Patent EP2985353	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   =*||||||=|*||||||||||||| targets:482   UGGGUGGCGCACCAGACAGUCCGG   505 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
JB169871.1	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   ||**||||||*||=|||||||||| targets:9   CCACUGGCACACCGGACAGUCCGG   32 Target Full Sequence	2.5	Sequence 7535 from Patent EP2559767	NA	coding protein	psRNATarget
HI409410.1	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   ||**||||||*||=|||||||||| targets:9   CCACUGGCACACCGGACAGUCCGG   32 Target Full Sequence	2.5	Sequence 7535 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241540.1	ncRNA:24   GGCCACCGUGCGGUCUGUCAGGCC   1   ||**||||||*||=|||||||||| targets:9   CCACUGGCACACCGGACAGUCCGG   32 Target Full Sequence	2.5	Sequence 7535 from Patent EP2985353	NA	coding protein	psRNATarget