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BaseInfo

ncRNA ID osa-miR528-3p
Species Oryza sativa
Class miRNA
Genome position Chr3:1667328-1667415 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 68 - CCUGUGCUUGCCUCUUCCAUU - 88
Stem-loop(if miRNA)              U   G     CA     UU   -UU     C
AGUGGAAGGGGCA GCA AGGAG  GGAGA  CAG   UGAAG U
||||||||||||| ||| |||||  |||||  |||   ||||| G
UUACCUUCUCCGU CGU UCCUC  UCUCU  GUU   ACUUC G
             U   G     --     CC   UUC     A
Stem-loop sequence AGUGGAAGGGGCAUGCAGAGGAGCAGGAGAUUCAGUUUGAAGCUGGACUUCACUUUUGCCUCUCUCUCCUGUGCUUGCCUCUUCCAUU

Reference

1 PMID:16126864
"Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice";
Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X;
Plant Physiol. 139:296-305(2005).
2 PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors";
Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y;
PLoS Pathog. 7:e1002176(2011).