ncRNA ID | osa-miR528-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:1667328-1667415 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 68 - CCUGUGCUUGCCUCUUCCAUU - 88 |
Stem-loop(if miRNA) |
             U   G     CA     UU   -UU     C AGUGGAAGGGGCA GCA AGGAG  GGAGA  CAG   UGAAG U ||||||||||||| ||| |||||  |||||  |||   ||||| G UUACCUUCUCCGU CGU UCCUC  UCUCU  GUU   ACUUC G              U   G     --     CC   UUC     A |
Stem-loop sequence | AGUGGAAGGGGCAUGCAGAGGAGCAGGAGAUUCAGUUUGAAGCUGGACUUCACUUUUGCCUCUCUCUCCUGUGCUUGCCUCUUCCAUU |
1 | PMID:16126864
"Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice"; Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X; Plant Physiol. 139:296-305(2005). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |