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BaseInfo

ncRNA ID	novel_zma_miR14
Species	Zea mays
Class	miRNA
Genome position	Chr2:213355088-213355291 [-]
Reference genome	RefGen_v4
Source	SRR2089708;SRR2089712;SRR2287031;SRR2287164
Length	24
Mature sequence(if miRNA)	181 - AUAGACUAUGGCGCCGAGGUACGU - 204
Stem-loop(if miRNA)	--    A      C             A                AAC      GC              A       C      -----------       U  GU   AUAG CUAUGG GCCGAGGUACGUG UGCGCUGGCAUAAACG   GUCGUG  GCUGACGUGGCACC AGCUCGG GCCAUA           CGGGCUU GU  A   |||| |||||| ||||||||||||| ||||||||||||||||   ||||||  |||||||||||||| ||||||| ||||||           ||||||| ||  C   UAUC GAUAUU CGGCUCUAUGCAC ACGCGACCGUGUUUGC   CAGCAC  CGGCUGCACCGUGG UCGAGCC CGGUAU           GCUCGAG CA  A GG    C      A             G                CUA      UA              C       A      AUAGAACCGCA       U  AU
Stem-loop sequence	AUAGACUAUGGCGCCGAGGUACGUGAUGCGCUGGCAUAAACGAACGUCGUGGCGCUGACGUGGCACCAAGCUCGGCGCCAUACGGGCUUUGUGUACAUAACUGAGCUCGACGCCAAGAUAUAUGGCACCGAGCUCGGUGCCACGUCGGCAUCACGACAUCCGUUUGUGCCAGCGCAGCACGUAUCUCGGCAUUAUAGCCUAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008666663.2	ncRNA:24   UGCAUGGAGCCGCGGUAUCAGAUA   1   |||||||||||||||||||*|||| targets:860   ACGUACCUCGGCGCCAUAGCCUAU   883 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103643463), mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:24   UGCAUGGAGCCGCGGUAUCAGAUA   1   |||*|||||||||||||||*|||| targets:1300   ACGCACCUCGGCGCCAUAGCCUAU   1323 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:24   UGCAUGGAGCCGCGGUAUCAGAUA   1   |||*|||||||||||||||*|||| targets:1298   ACGCACCUCGGCGCCAUAGCCUAU   1321 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:24   UGCAUGGAGCCGCGGUAUCAGAUA   1   |||*|||||||||||||||*|||| targets:1357   ACGCACCUCGGCGCCAUAGCCUAU   1380 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:24   UGCAUGGAGCCGCGGUAUCAGAUA   1   |||*|||||||||||||||*|||| targets:1357   ACGCACCUCGGCGCCAUAGCCUAU   1380 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI405915.1	ncRNA:24   UGCA-UGGAGCCGCGGUAUCAGAUA   1   ==||-||||||||||||*||||||| targets:90   GUGUUACCUCGGCGCCACAGUCUAU   114 Target Full Sequence	1.5	Sequence 4040 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238045.1	ncRNA:24   UGCA-UGGAGCCGCGGUAUCAGAUA   1   ==||-||||||||||||*||||||| targets:90   GUGUUACCUCGGCGCCACAGUCUAU   114 Target Full Sequence	1.5	Sequence 4040 from Patent EP2985353	NA	coding protein	psRNATarget
JB166376.1	ncRNA:24   UGCA-UGGAGCCGCGGUAUCAGAUA   1   ==||-||||||||||||*||||||| targets:90   GUGUUACCUCGGCGCCACAGUCUAU   114 Target Full Sequence	1.5	Sequence 4040 from Patent EP2559767	NA	coding protein	psRNATarget