| ncRNA ID | osa-miR528-5p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr3:1667328-1667415 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 3 - UGGAAGGGGCAUGCAGAGGAG - 23 |
| Stem-loop(if miRNA) |
U G CA UU -UU C AGUGGAAGGGGCA GCA AGGAG GGAGA CAG UGAAG U ||||||||||||| ||| ||||| ||||| ||| ||||| G UUACCUUCUCCGU CGU UCCUC UCUCU GUU ACUUC G U G -- CC UUC A |
| Stem-loop sequence | AGUGGAAGGGGCAUGCAGAGGAGCAGGAGAUUCAGUUUGAAGCUGGACUUCACUUUUGCCUCUCUCUCCUGUGCUUGCCUCUUCCAUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015787756.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group L-ascorbate oxidase (LOC4341337), transcript variant X2, mRNA | L-ascorbate oxidase(LOC4341337) | coding protein | psRNATarget | |||||||||
| AK105605.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-200-A11, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015787755.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group L-ascorbate oxidase (LOC4341337), transcript variant X1, mRNA | L-ascorbate oxidase(LOC4341337) | coding protein | psRNATarget |
| 1 | PMID:16126864
"Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice"; Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X; Plant Physiol. 139:296-305(2005). |
| 2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |