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BaseInfo

ncRNA ID novel_zma_miR2
Species Zea mays
Class miRNA
Genome position Chr1:306278249-306278326 [+]
Reference genome RefGen_v4
Source SRR1583941;SRR1583942
Length 21
Mature sequence(if miRNA) 1 - UCCUCCGUUUCUUUUUAUUAG - 21
Stem-loop(if miRNA) --                                    A
  UCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCA A
  ||||||||||||||||||||||||||||||||||||
  GGGAGGCAAAGAAAAAUAAUCAGCGACCUAUCACGU A
GA                                    U
Stem-loop sequence UCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCAAAAUUGCACUAUCCAGCGACUAAUAAAAAGAAACGGAGGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ061772.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||||||||
targets:243   CUAAUAAAAAGAAACGGAGGA   263

0.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
BT024153.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||||||||
targets:240   CUAAUAAAAAGAAACGGAGGA   260

0.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
HI405842.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||||=|||
targets:56   CUAAUAAAAAGAAACGGGGGA   76

1.5 Sequence 3967 from Patent EP2074227 NA coding protein psRNATarget
JB166303.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||||=|||
targets:56   CUAAUAAAAAGAAACGGGGGA   76

1.5 Sequence 3967 from Patent EP2559767 NA coding protein psRNATarget
LQ237972.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||||=|||
targets:56   CUAAUAAAAAGAAACGGGGGA   76

1.5 Sequence 3967 from Patent EP2985353 NA coding protein psRNATarget
LQ237960.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:59   CUAAUAAAAAGAAACGGAGGG   79

1.0 Sequence 3955 from Patent EP2985353 NA coding protein psRNATarget
HI405830.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:59   CUAAUAAAAAGAAACGGAGGG   79

1.0 Sequence 3955 from Patent EP2074227 NA coding protein psRNATarget
JB166291.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:59   CUAAUAAAAAGAAACGGAGGG   79

1.0 Sequence 3955 from Patent EP2559767 NA coding protein psRNATarget
HI408623.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:68   CUAAUAAAAAGAAACGGAGGG   88

1.0 Sequence 6748 from Patent EP2074227 NA coding protein psRNATarget
JB169084.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:68   CUAAUAAAAAGAAACGGAGGG   88

1.0 Sequence 6748 from Patent EP2559767 NA coding protein psRNATarget
LQ240753.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:68   CUAAUAAAAAGAAACGGAGGG   88

1.0 Sequence 6748 from Patent EP2985353 NA coding protein psRNATarget
XM_008664463.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:152   CUAAUAAAAAGAAACGGAGGG   172

1.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
EU973473.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:708   CUAAUAAAAAGAAACGGAGGG   728

1.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
NM_001143050.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:1143   CUAAUAAAAAGAAACGGAGGG   1163

1.0 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
BT037092.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:1143   CUAAUAAAAAGAAACGGAGGG   1163

1.0 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
EU970288.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:1382   CUAAUAAAAAGAAACGGAGGG   1402

1.0 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
XM_008669400.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:1659   CUAAUAAAAAGAAACGGAGGG   1679

1.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008675770.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:1867   CUAAUAAAAAGAAACGGAGGG   1887

1.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:2034   CUAAUAAAAAGAAACGGAGGG   2054

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:2101   CUAAUAAAAAGAAACGGAGGG   2121

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008664460.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:172   CUAAUAAAAAGAAACGGAGGG   192

1.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:3200   CUAAUAAAAAGAAACGGAGGG   3220

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020544902.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||||||=
targets:3209   CUAAUAAAAAGAAACGGAGGG   3229

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001328133.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |||||||||||||||||||-||
targets:823   CUAAUAAAAAGAAACGGAGAGA   844

3.0 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
BT070166.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |||||||||||||||||||-||
targets:823   CUAAUAAAAAGAAACGGAGAGA   844

3.0 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
XM_008656936.2
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |||||||||||||||||||-||
targets:223   CUAAUAAAAAGAAACGGAGAGA   244

3.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
LQ237954.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||*|||||
targets:59   CUAAUAAAAAGAAACAGAGGA   79

1.5 Sequence 3949 from Patent EP2985353 NA coding protein psRNATarget
JB166285.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||*|||||
targets:59   CUAAUAAAAAGAAACAGAGGA   79

1.5 Sequence 3949 from Patent EP2559767 NA coding protein psRNATarget
HI405824.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||*|||||
targets:59   CUAAUAAAAAGAAACAGAGGA   79

1.5 Sequence 3949 from Patent EP2074227 NA coding protein psRNATarget
LQ235495.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||||||**
targets:40   CUAAUAAAAAGAAACGGAGCC   60

2.5 Sequence 1490 from Patent EP2985353 NA coding protein psRNATarget
JB163826.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||||||**
targets:40   CUAAUAAAAAGAAACGGAGCC   60

2.5 Sequence 1490 from Patent EP2559767 NA coding protein psRNATarget
HI403365.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |||||||||||||||||||**
targets:40   CUAAUAAAAAGAAACGGAGCC   60

2.5 Sequence 1490 from Patent EP2074227 NA coding protein psRNATarget
LQ237958.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||*|||||||||=
targets:59   CUAAUAAAAAAAAACGGAGGG   79

2.5 Sequence 3953 from Patent EP2985353 NA coding protein psRNATarget
HI405828.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||*|||||||||=
targets:59   CUAAUAAAAAAAAACGGAGGG   79

2.5 Sequence 3953 from Patent EP2074227 NA coding protein psRNATarget
JB166289.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||*|||||||||=
targets:59   CUAAUAAAAAAAAACGGAGGG   79

2.5 Sequence 3953 from Patent EP2559767 NA coding protein psRNATarget
JB170476.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
LQ240748.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
LQ241075.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
HI408945.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB169079.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
LQ242091.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI408618.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
LQ242145.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
JB169406.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI410015.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:63   CAAAUAAAAAGAAACGGAGGG   83

1.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
HI405860.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||*|||||||||=
targets:64   CUAAUAAAAAAAAACGGAGGG   84

2.5 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
JB166321.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||*|||||||||=
targets:64   CUAAUAAAAAAAAACGGAGGG   84

2.5 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
LQ237990.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||*|||||||||=
targets:64   CUAAUAAAAAAAAACGGAGGG   84

2.5 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
EZ067019.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:6   CAAAUAAAAAGAAACGGAGGG   26

1.0 TSA: Zea mays contig02653, mRNA sequence NA coding protein psRNATarget
EU964901.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:556   CAAAUAAAAAGAAACGGAGGG   576

1.0 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
NM_001151882.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:628   CAAAUAAAAAGAAACGGAGGG   648

1.0 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:628   CAAAUAAAAAGAAACGGAGGG   648

1.0 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT060817.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:289   CAAAUAAAAAGAAACGGAGGG   309

1.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
XM_008675381.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  ||||||||||||||||*|||=
targets:1274   CUAAUAAAAAGAAACGAAGGG   1294

2.5 PREDICTED: Zea mays probable WRKY transcription factor 48 (LOC103649650), mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1225   CAAAUAAAAAGAAACGGAGGG   1245

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1347   CAAAUAAAAAGAAACGGAGGG   1367

1.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1347   CAAAUAAAAAGAAACGGAGGG   1367

1.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008647346.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:200   CAAAUAAAAAGAAACGGAGGG   220

1.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1414   CAAAUAAAAAGAAACGGAGGG   1434

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1331   CAAAUAAAAAGAAACGGAGGG   1351

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
BT043433.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1404   CAAAUAAAAAGAAACGGAGGG   1424

1.0 Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds NA coding protein psRNATarget
XM_008677073.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1586   CAAAUAAAAAGAAACGGAGGG   1606

1.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1602   CAAAUAAAAAGAAACGGAGGG   1622

1.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:2059   CAAAUAAAAAGAAACGGAGGG   2079

1.0 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008651543.2
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:2555   CAAAUAAAAAGAAACGGAGGG   2575

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:2494   CAAAUAAAAAGAAACGGAGGG   2514

1.0 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:1522   CAAAUAAAAAGAAACGGAGGG   1542

1.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:2855   CAAAUAAAAAGAAACGGAGGG   2875

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:2872   CAAAUAAAAAGAAACGGAGGG   2892

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:2978   CAAAUAAAAAGAAACGGAGGG   2998

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||||||||=
targets:3757   CAAAUAAAAAGAAACGGAGGG   3777

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
HI409699.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|=||||||||||||||||=
targets:63   CAAGUAAAAAGAAACGGAGGG   83

2.0 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ241829.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|=||||||||||||||||=
targets:63   CAAGUAAAAAGAAACGGAGGG   83

2.0 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
JB170160.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|=||||||||||||||||=
targets:63   CAAGUAAAAAGAAACGGAGGG   83

2.0 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
JB163740.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||=|||||=
targets:70   CAAAUAAAAAGAAAUGGAGGG   90

2.5 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||=|||||=
targets:70   CAAAUAAAAAGAAAUGGAGGG   90

2.5 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
LQ235409.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||=|||||=
targets:70   CAAAUAAAAAGAAAUGGAGGG   90

2.5 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
LQ235499.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |*|||||||||||||||||-||
targets:70   CAAAUAAAAAGAAACGGAGAGA   91

3.0 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
JB163830.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |*|||||||||||||||||-||
targets:70   CAAAUAAAAAGAAACGGAGAGA   91

3.0 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
LQ235531.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |*|||||||||||||||||-||
targets:70   CAAAUAAAAAGAAACGGAGAGA   91

3.0 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
JB163862.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |*|||||||||||||||||-||
targets:70   CAAAUAAAAAGAAACGGAGAGA   91

3.0 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
HI403369.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |*|||||||||||||||||-||
targets:70   CAAAUAAAAAGAAACGGAGAGA   91

3.0 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
HI403401.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |*|||||||||||||||||-||
targets:70   CAAAUAAAAAGAAACGGAGAGA   91

3.0 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
EZ061437.1
ncRNA:21   GAUUAUUUUUCUUUGCCUC-CU   1
  |*|||||||||||||||||-||
targets:227   CAAAUAAAAAGAAACGGAGAGA   248

3.0 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
LQ241364.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-|||||||||||||||||
targets:61   ACAACUAAAAAGAAACGGAGGA   82

2.0 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
HI409234.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-|||||||||||||||||
targets:61   ACAACUAAAAAGAAACGGAGGA   82

2.0 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
JB169695.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-|||||||||||||||||
targets:61   ACAACUAAAAAGAAACGGAGGA   82

2.0 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
BT088136.1
ncRNA:21   GAUUAUUUUUCUUUGCCU-CCU   1
  |*||||||||||||||||-|||
targets:813   CAAAUAAAAAGAAACGGAAGGA   834

3.0 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
NM_001196908.1
ncRNA:21   GAUUAUUUUUCUUUGCCU-CCU   1
  |*||||||||||||||||-|||
targets:813   CAAAUAAAAAGAAACGGAAGGA   834

3.0 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
BT066079.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  *|=|||||||||||*||||||
targets:1066   AUGAUAAAAAGAAAAGGAGGA   1086

2.5 Zea mays full-length cDNA clone ZM_BFb0279I09 mRNA, complete cds NA coding protein psRNATarget
XM_020551575.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  *|=|||||||||||*||||||
targets:1254   AUGAUAAAAAGAAAAGGAGGA   1274

2.5 PREDICTED: Zea mays uncharacterized LOC100283500 (AY110290), transcript variant X1, mRNA NA coding protein psRNATarget
BT054978.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  *|=|||||||||||*||||||
targets:1489   AUGAUAAAAAGAAAAGGAGGA   1509

2.5 Zea mays full-length cDNA clone ZM_BFc0160F23 mRNA, complete cds NA coding protein psRNATarget
EU964939.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  *|=|||||||||||*||||||
targets:1528   AUGAUAAAAAGAAAAGGAGGA   1548

2.5 Zea mays clone 282675 palmitoyltransferase ZDHHC9 mRNA, complete cds NA coding protein psRNATarget
NM_001156400.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  *|=|||||||||||*||||||
targets:1528   AUGAUAAAAAGAAAAGGAGGA   1548

2.5 Zea mays uncharacterized LOC100283500 (AY110290), mRNA NA coding protein psRNATarget
LQ239360.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:64   ACAACUAAAAAGAAACGGAGGG   85

3.0 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
HI407230.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:64   ACAACUAAAAAGAAACGGAGGG   85

3.0 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
JB167691.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:64   ACAACUAAAAAGAAACGGAGGG   85

3.0 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
BT062468.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:629   ACAACUAAAAAGAAACGGAGGG   650

3.0 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
XM_008656230.2
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:45   ACAACUAAAAAGAAACGGAGGG   66

3.0 PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:1220   ACAACUAAAAAGAAACGGAGGG   1241

3.0 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:1573   ACAACUAAAAAGAAACGGAGGG   1594

3.0 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:1573   ACAACUAAAAAGAAACGGAGGG   1594

3.0 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
XM_008674191.2
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:1209   ACAACUAAAAAGAAACGGAGGG   1230

3.0 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
LQ241458.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI408710.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
JB169171.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
HI409616.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||*|||||=
targets:63   CAAAUAAAAAGAAAGGGAGGG   83

2.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
HI408570.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||||||*||||||=
targets:63   CAAAUAAAAAGAACCGGAGGG   83

2.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
LQ240840.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
LQ242326.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
LQ240700.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||||||*||||||=
targets:63   CAAAUAAAAAGAACCGGAGGG   83

2.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
JB169031.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||||||*||||||=
targets:63   CAAAUAAAAAGAACCGGAGGG   83

2.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
HI410196.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
JB170077.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||*|||||=
targets:63   CAAAUAAAAAGAAAGGGAGGG   83

2.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
JB170657.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*|||||||*||||||||||=
targets:63   CAAAUAAAACGAAACGGAGGG   83

2.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
LQ241746.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |*||||||||||||*|||||=
targets:63   CAAAUAAAAAGAAAGGGAGGG   83

2.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
XM_020551485.1
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||=
targets:2586   ACAACUAAAAAGAAACGGAGGG   2607

3.0 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
HI407305.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |***||||||||||||||||=
targets:65   CAUCUAAAAAGAAACGGAGGG   85

3.0 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
JB167766.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |***||||||||||||||||=
targets:65   CAUCUAAAAAGAAACGGAGGG   85

3.0 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
LQ239435.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |***||||||||||||||||=
targets:65   CAUCUAAAAAGAAACGGAGGG   85

3.0 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
XM_008667486.2
ncRNA:21   GAUU-AUUUUUCUUUGCCUCCU   1
  **||-||||||||||||||||*
targets:1390   ACAACUAAAAAGAAACGGAGGU   1411

3.0 PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA NA coding protein psRNATarget
EU968044.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |***||||||||||||||||=
targets:1083   CAUCUAAAAAGAAACGGAGGG   1103

3.0 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:21   GAUUAUUUUUCUUUGCCUCCU   1
  |***||||||||||||||||=
targets:971   CAUCUAAAAAGAAACGGAGGG   991

3.0 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
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