ncRNA ID | osa-miR166e-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:765724-765860 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 108 - UCGAACCAGGCUUCAUUCCCC - 128 |
Stem-loop(if miRNA) |
          U      UU         A  GC   UU     G  U   UUUU    GUUUA      CA UGUUUCUGGG GGAAUG  GUCUGGUUC AG  CCC  AGGAU UG GAU    GAUG     UGCAUU  U |||||||||| ||||||  ||||||||| ||  |||  ||||| || |||    ||||     |||||| AUAGAGACUC CCUUAC  CGGACCAAG UC  GGG  UUCUA GC CUA    CUAC     GCGUAG  C           C      UU         C  UU   -U     G  U   ---U    ---AA      UU |
Stem-loop sequence | UGUUUCUGGGUGGAAUGUUGUCUGGUUCAAGGCCCCUUAGGAUGUGUGAUUUUUGAUGGUUUAUGCAUUCAUCUUGAUGCGAACAUCUAUCUCGGAUCUUUGGGUUCUCGAACCAGGCUUCAUUCCCCUCAGAGAUA |
1 | PMID:12101121
"MicroRNAs in plants"; Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP; Genes Dev. 16:1616-1626(2002). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |