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BaseInfo

ncRNA ID	ath-miRf10007-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GAGUCCACCGGAGCCACUCU - NA
Stem-loop(if miRNA)	-    A   U             UGUGU   -C   -AA   GA  GAGA GUG CUCCGGUGGAUUU     AGG  UCU   GGA  A  |||| ||| |||||||||||||     |||  |||   |||  UUCU CAC GAGGCCACCUGAG     UCC  AGA   CCU  U C    -   C             -----   AA   CCA   AG
Stem-loop sequence	GAGAAGUGUCUCCGGUGGAUUUUGUGUAGGCUCUAAGGAGAAUGAUCCACCAGAAACCUGAGUCCACCGGAGCCACUCUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY088388.1	ncRNA:20   UCUCACCGAGGCCACCUGAG   1   |||||||||||||||||||| targets:655   AGAGUGGCUCCGGUGGACUC   674 Target Full Sequence	0.0	Arabidopsis thaliana clone 6399 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_102112.4	ncRNA:20   UCUCACCGAGGCCACCUGAG   1   |||||||||||||||||||| targets:826   AGAGUGGCUCCGGUGGACUC   845 Target Full Sequence	0.0	Arabidopsis thaliana Plant neutral invertase family protein (A/N-InvD), mRNA	Plant neutral invertase family protein(A/N-InvD)	coding protein	psRNATarget
NM_001332556.1	ncRNA:20   UCUCACCGAGGCCACCUGAG   1   |||||||||||||||||||| targets:826   AGAGUGGCUCCGGUGGACUC   845 Target Full Sequence	0.0	Arabidopsis thaliana Plant neutral invertase family protein (A/N-InvD), mRNA	Plant neutral invertase family protein(A/N-InvD)	coding protein	psRNATarget
BT014956.1	ncRNA:20   UCUCACCGAGGCCACCUGAG   1   *|=||**||||||||||||| targets:614   CGGGUAACUCCGGUGGACUC   633 Target Full Sequence	3.0	Arabidopsis thaliana At5g56840 gene, complete cds	NA	coding protein	psRNATarget
AY519517.1	ncRNA:20   UCUCACCGAGGCCACCUGAG   1   *|=||**||||||||||||| targets:614   CGGGUAACUCCGGUGGACUC   633 Target Full Sequence	3.0	Arabidopsis thaliana MYB transcription factor (At5g56840) mRNA, complete cds	NA	coding protein	psRNATarget
BX833960.1	ncRNA:20   UCUCACCGAGGCCACCUGAG   1   *|=||**||||||||||||| targets:641   CGGGUAACUCCGGUGGACUC   660 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT012528.1	ncRNA:20   UCUCACCGAGGCCACCUGAG   1   *|=||**||||||||||||| targets:710   CGGGUAACUCCGGUGGACUC   729 Target Full Sequence	3.0	Arabidopsis thaliana At5g56840 gene, complete cds	NA	coding protein	psRNATarget
NM_125067.4	ncRNA:20   UCUCACCGAGGCCACCUGAG   1   *|=||**||||||||||||| targets:765   CGGGUAACUCCGGUGGACUC   784 Target Full Sequence	3.0	Arabidopsis thaliana myb-like transcription factor family protein mRNA	myb-like transcription factor family protein(AT5G56840)	coding protein	psRNATarget