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BaseInfo

ncRNA ID	ath-miRf10006-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UACCUUUCUGUCUUGUGUCA - NA
Stem-loop(if miRNA)	AUU                         ---A         AUU   GAAAGCUGUUUAUUAAUACAUGGCGUUU    GAGACUGACACAAGGCAGAAAGGUA    CAUUUGACU   CAC                            A    |||||||||||||||||||||||||    |||||||||   |||                            G    UUCUGACUGUGUUCUGUCUUUCCAU    GUAAAUUGG   ACC                            U UAU                         AGUA         AAG   GAAUAUGUAAUGUUUAAAUGUUAUUAGU
Stem-loop sequence	AUUGAGACUGACACAAGGCAGAAAGGUAACAUUUGACUAUUCACGAAAGCUGUUUAUUAAUACAUGGCGUUUAGUUGAUUAUUGUAAAUUUGUAAUGUAUAAGCCAGAAGGUUAAAUGAUGAUACCUUUCUGUCUUGUGUCAGUCUUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY087490.1	ncRNA:20   ACUGUGUUCUGUCUUUCCAU   1   |||*|||||||||||||||* targets:475   UGAGACAAGACAGAAAGGUU   494 Target Full Sequence	2.0	Arabidopsis thaliana clone 35999 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_112543.3	ncRNA:20   ACUGUGUUCUGUCUUUCCAU   1   |||*|||||||||||||||* targets:563   UGAGACAAGACAGAAAGGUU   582 Target Full Sequence	2.0	Arabidopsis thaliana Fumarylacetoacetate (FAA) hydrolase family mRNA	Fumarylacetoacetate (FAA) hydrolase family(AT3G16700)	coding protein	psRNATarget
NM_001084695.2	ncRNA:20   ACUGUGUUCUGUCUUUCCAU   1   |||*|||||||||||||||* targets:627   UGAGACAAGACAGAAAGGUU   646 Target Full Sequence	2.0	Arabidopsis thaliana Fumarylacetoacetate (FAA) hydrolase family mRNA	Fumarylacetoacetate (FAA) hydrolase family(AT3G16700)	coding protein	psRNATarget
AK175666.1	ncRNA:20   ACUGUGUUCUGUCUUUCCAU   1   |||*|||||||||||||||* targets:938   UGAGACAAGACAGAAAGGUU   957 Target Full Sequence	2.0	Arabidopsis thaliana mRNA for putative decarboxilase, complete cds, clone: RAFL22-15-M02	NA	coding protein	psRNATarget
NM_001338251.1	ncRNA:20   ACUGUGUUCUGUCUUUCCAU   1   |||*|||||||||||||||* targets:962   UGAGACAAGACAGAAAGGUU   981 Target Full Sequence	2.0	Arabidopsis thaliana Fumarylacetoacetate (FAA) hydrolase family mRNA	Fumarylacetoacetate (FAA) hydrolase family(AT3G16700)	coding protein	psRNATarget
NM_102071.2	ncRNA:20   ACUGUGUUCUGUCUUUCCAU   1   |||||||||=|||||||||* targets:742   UGACACAAGGCAGAAAGGUC   761 Target Full Sequence	2.5	Arabidopsis thaliana Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TPPC), mRNA	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(TPPC)	coding protein	psRNATarget