ncRNA ID | osa-miR166h-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:32435174-32435292 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 87 - GGAAUGUUGGCUGGCUCGAGG - 107 |
Stem-loop(if miRNA) |
GG                UU G    CU   G  A       CUUAAU   UCU     GA   UGGCUUGUGGGGAAUG  G CUGG  CGA GU UCCACAU      UCC   CCGGC  U   ||||||||||||||||  | ||||  ||| || |||||||      |||   |||||   GCCGAACGCUCCUUAC  C GACC  GCU CG AGGUGUG      GGG   GGCCG  C UA                UU G    AG   G  A       -----C   CUC     AG |
Stem-loop sequence | GGUGGCUUGUGGGGAAUGUUGGCUGGCUCGAGGUAUCCACAUCUUAAUUCCUCUCCGGCGAUCGAGCCGGCUCGGGCGUGUGGAAGCGUCGGACCAGGCUUCAUUCCUCGCAAGCCGAU |
1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |