ncRNA ID | osa-miR166k-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:32435003-32435129 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 95 - GGUUUGUUGUCUGGCUCGAGG - 115 |
Stem-loop(if miRNA) |
AUUA          U   UU      CU      A      -A    GGUUUCUCCUUUCCUA     GGUUAAGGGG UUG  GUCUGG  CGAGGC UCCGGG  CUCC                C     |||||||||| |||  ||||||  |||||| ||||||  ||||                U     CCAAUUUCCC AAC  CGGACC  GCUCCG AGGCUC  GCGG                G CGUA          U   UU      AG      -      GA    CCUUUAAUCCGCGGAG |
Stem-loop sequence | AUUAGGUUAAGGGGUUUGUUGUCUGGCUCGAGGCAUCCGGGACUCCGGUUUCUCCUUUCCUACUGGAGGCGCCUAAUUUCCGGCGAGCUCGGAGCCUCGGACCAGGCUUCAAUCCCUUUAACCAUGC |
1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |