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BaseInfo

ncRNA ID osa-miR2863c
Species Oryza sativa
Class miRNA
Genome position Chr2:29869493-29869606 [+]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 82 - UUAGUAGGACUAGAAUGGGCCAAA - 105
Stem-loop(if miRNA) -       UC   A    C        A      A                  U  A
 GGGUAUU  UUG CCCA UUUAGUUC ACUAAA UGAACUAAGUUUCACUUU AG G
 |||||||  ||| |||| |||||||| |||||| |||||||||||||||||| || A
 CCCAUAA  AAC GGGU AGAUCAGG UGAUUU ACUUGAUUUAAAGUGAAA UC G
A       GA   C    A        A      -                  -  U
Stem-loop sequence GGGUAUUUCUUGACCCACUUUAGUUCAACUAAAAUGAACUAAGUUUCACUUUUAGAGAGUCUAAAGUGAAAUUUAGUUCAUUUAGUAGGACUAGAAUGGGCCAAAGAAUACCCA

Reference

1 PMID:21525786
"Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus";
Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D;
RNA Biol. 8:538-547(2011).
2 PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage";
Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ;
Plant Cell. 23:4185-4207(2011).