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BaseInfo

ncRNA ID	ath-miRf10005-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GUGCAUGUGCAUGUGCAUGU - NA
Stem-loop(if miRNA)	AUAG     G     G     G     -   -   G G    G   AG  A GC    GCAUA GCAUA GCAUA GCAUA GCC AUG C AUGG CAU  GC U ||    ||||| ||||| ||||| ||||| ||| ||| | |||| |||  || CG    CGUGU CGUGU CGUGU CGUGU CGG UAC G UACC GUA  CG A   GGUA     A     A     A     A   A   G G    G   --  G
Stem-loop sequence	GCAUAGGCAUAGGCAUAGGCAUAGGCAUAGCCAUGGCGAUGGGCAUAGGCAUAGGCAUGGCCAUGGGCAUAGGCAUGUGCAUGUGCAUGUGCAUGUGCAUGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_101931.3	ncRNA:20   UGUACGUGUACGUGUACGUG   1   |||||||||||||||||||| targets:1267   ACAUGCACAUGCACAUGCAC   1286 Target Full Sequence	0.0	Arabidopsis thaliana F-box family protein mRNA	F-box family protein(AT1G20790)	coding protein	psRNATarget
BX828898.1	ncRNA:20   UGUACGUGUACGUGUACGUG   1   =||||||||||||||||=|| targets:633   GCAUGCACAUGCACAUGUAC   652 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL48ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX826976.1	ncRNA:20   UGUACGUGUACGUGUACGUG   1   =||||||||||||||||=|| targets:1511   GCAUGCACAUGCACAUGUAC   1530 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZH06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AF418241.1	ncRNA:20   UGUACGUGUACGUGUACGUG   1   =||||||||||||||||=|| targets:1523   GCAUGCACAUGCACAUGUAC   1542 Target Full Sequence	1.5	Arabidopsis thaliana Col-0 2-oxoglutarate-dependent dioxygenase (AOP2) pseudogene, mRNA sequence	NA	coding protein	psRNATarget
BX818260.1	ncRNA:20   UGUACGUGUACGUGUACGUG   1   |||||||=|||||||||||= targets:247   ACAUGCAUAUGCACAUGCAU   266 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL6ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX818257.1	ncRNA:20   UGUACGUGUACGUGUACGUG   1   |||||||=|||||||||||= targets:249   ACAUGCAUAUGCACAUGCAU   268 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL6ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_001084313.2	ncRNA:20   UGUACGUGUACGUGUACGUG   1   |||||||=|||||||||||= targets:275   ACAUGCAUAUGCACAUGCAU   294 Target Full Sequence	2.5	Arabidopsis thaliana ROTUNDIFOLIA like 21 (RTFL21), mRNA	ROTUNDIFOLIA like 21(RTFL21)	coding protein	psRNATarget
BX814476.1	ncRNA:20   UGUACGUGUACGUGUACGUG   1   ||||||*|||||||||*||| targets:897   ACAUGCUCAUGCACAUUCAC   916 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget