| ncRNA ID | ath-miR472-5p |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr1:4182132-4182299 [-] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 135 - AUGGUCGAAGUAGGCAAAAUC - 155 |
| Stem-loop(if miRNA) |
UC - U A C C - -UU --A GA AUGAAU UG ---AU G GA UGUAUGUAUG UAUGG CG AGUAGG AAAAUCU AC C UCU GCA UCAACA UUUG GA AGAU UUG U |||||||||| ||||| || |||||| ||||||| || | ||| ||| |||||| |||| || |||| ||| ACAUACAUAC AUACC GC UCAUCC UUUUAGA UG G AGA CGU AGUUGU GAAC UU UUUG AAU U CC C C C U A A UUU ACG AG ------ GU GUGGU G GU |
| Stem-loop sequence | UCUGUAUGUAUGUAUGGUCGAAGUAGGCAAAAUCUCACCUUUCUAGCAGAUCAACAAUGAAUUUUGUGGAAUAGAUGUUGGAUUUGUAAGGUUUUGGUGUUUGCAAGUGUUGAGAUGCGCAAGAUUUGAGUAAGAUUUUUCCUACUCCGCCCAUACCAUACAUACACC |
| 1 | PMID:16954541
"MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant"; Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC; Genome Res. 16:1276-1288(2006). |
| 2 | PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007). |
| 3 | PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006). |
| 4 | PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots"; Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA; BMC Genomics. 14:701(2013). |